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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA01G0315200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 425aa MW: 45631.4 Da PI: 7.7337 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA01G0315200.1 | genome | AGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 93 | 139 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT +Ede l++ v ++G + W+tIa+ ++ gR +kqc++rw ++l
ORGLA01G0315200.1 93 KGAWTRQEDEVLKQMVILHGDRKWATIAKSLP-GRIGKQCRERWTNHL 139
79******************************.************996 PP
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2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 145 | 187 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
++ WT+e+d l++a+k +G++ W+ Iar+++ gR+++ +k++w+
ORGLA01G0315200.1 145 KDVWTEEDDRTLIEAHKTYGNR-WSVIARCLP-GRSENAVKNHWN 187
578*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 425 aa
Download sequence Send
to blast |
MMGSGMPHMY FASSSHGTGA HYQSPGGAPI TMAVPDMGFL VAGIGMAPSS FVMPEGALAA 60 SYSAMATVPV GVVVPQQQSS RFGGNNGNPG SFKGAWTRQE DEVLKQMVIL HGDRKWATIA 120 KSLPGRIGKQ CRERWTNHLR PDIKKDVWTE EDDRTLIEAH KTYGNRWSVI ARCLPGRSEN 180 AVKNHWNATK RSLKSKRRMK KKSVQVVNSP PGQLSPLEEY IRSQYPSAVE TTPPPPAVPA 240 PPSDVIVHGA GSVSAGPTVA TQEPTGTNPS EMGIYLGLGN PAGPTTQQLA AMNLNMSLAP 300 DLNAYNDQRE GYYLPFVPQG NLHYGMHVPA PPVQQQQQQG ISVDQGLHSS CLSLYHPFPG 360 THPVSLDFGC QSSNHANAGG YYSEAGPSSG SGSGDPDDVD VIQMASRQFL MPSEAEVTLD 420 LTRFK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287995 | 0.0 | AK287995.1 Oryza sativa Japonica Group cDNA, clone: J075101C16, full insert sequence. |
GenBank | FJ940215 | 0.0 | FJ940215.1 Oryza sativa Japonica Group clone KCS005D12 Myb protein mRNA, complete cds. |