PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC12G03020.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 488aa MW: 52796.1 Da PI: 7.1606

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC12G03020.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	7.9e-11	184	210	7	33
HHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLee 33 rr+++NReAAr+sR+RKka+i++Le OPUNC12G03020.1 184 MRRLAQNREAARKSRLRKKAYIQQLES 210 69***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.7E-7	176	224	No hit	No description
SMART	SM00338	1.8E-5	177	253	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.128	180	224	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.21E-6	182	218	No hit	No description
Pfam	PF00170	1.4E-7	183	211	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	185	200	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.9E-30	262	336	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence Send to blast
MGEARSSRGQ NPHLVLGYGF HGTTLPNSMA SANLFEQGGG GASATYFGEL EEALVHQVAT 60 LRRRAQQTAT TTNSHHGHTT SFSTATAAAT ATARPPATLD IFPSWPMRRS SLPTPKEGGS 120 NVTADTTDSE SSSKNNGDQG AVAADMASQF DQIPLQQEKQ HKKMAASSTH SDHRMTKTLD 180 PKIMRRLAQN REAARKSRLR KKAYIQQLES SKLRLAQMEQ DLERARSQGL LLGGSPGGNT 240 SAGAAMFDAE YGRWLDDGGR RMAELHGGLH AHLPDGDLRA IVDDAVAHYD ELFRLRAAAA 300 KADVFHLITG TWATPAERCF LWMGGFRPSD LLKTVAPQLD PLTEQQVVGI CSLQQSSQQA 360 EEALSQGLEQ LHQSLAETVA NGGSVVDEAS LGSFMGCMAL ALGKLSNLEG FVIQADNLRQ 420 QTLHQMHRIL TIRQAARCFL AIGEYHNRLR ALSSLWASRP REVLVADEGN CGELSIAAQP 480 SESQFSAF

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence Send to blast

MGEARSSRGQ NPHLVLGYGF HGTTLPNSMA SANLFEQGGG GASATYFGEL EEALVHQVAT  60
LRRRAQQTAT TTNSHHGHTT SFSTATAAAT ATARPPATLD IFPSWPMRRS SLPTPKEGGS  120
NVTADTTDSE SSSKNNGDQG AVAADMASQF DQIPLQQEKQ HKKMAASSTH SDHRMTKTLD  180
PKIMRRLAQN REAARKSRLR KKAYIQQLES SKLRLAQMEQ DLERARSQGL LLGGSPGGNT  240
SAGAAMFDAE YGRWLDDGGR RMAELHGGLH AHLPDGDLRA IVDDAVAHYD ELFRLRAAAA  300
KADVFHLITG TWATPAERCF LWMGGFRPSD LLKTVAPQLD PLTEQQVVGI CSLQQSSQQA  360
EEALSQGLEQ LHQSLAETVA NGGSVVDEAS LGSFMGCMAL ALGKLSNLEG FVIQADNLRQ  420
QTLHQMHRIL TIRQAARCFL AIGEYHNRLR ALSSLWASRP REVLVADEGN CGELSIAAQP  480
SESQFSAF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK101620	0.0	AK101620.1 Oryza sativa Japonica Group cDNA clone:J033052J02, full insert sequence.
GenBank	FJ750929	0.0	FJ750929.1 Oryza sativa clone KCS115G01 DNA-binding protein mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015619722.1	0.0	transcription factor TGAL11
Swissprot	Q2QXL0	0.0	TGL11_ORYSJ; Transcription factor TGAL11
TrEMBL	A0A0E0MJQ4	0.0	A0A0E0MJQ4_ORYPU; Uncharacterized protein
STRING	OPUNC12G03020.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-133	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]