PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC09G11090.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 379aa MW: 40328.6 Da PI: 9.7471

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC09G11090.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.9	1.1e-13	300	350	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ Nk+L + e+ ++ OPUNC09G11090.1 300 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEMNKELERKQAEIMEM 350 79************************************9998777766665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.5E-11	296	361	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.806	298	349	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.29E-23	300	352	No hit	No description
Pfam	PF00170	1.4E-11	300	351	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.0E-13	300	349	No hit	No description
SuperFamily	SSF57959	9.38E-10	300	348	No hit	No description
PROSITE pattern	PS00036	0	303	318	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009737	Biological Process	response to abscisic acid
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence Send to blast
MLTDRWGGRR EAMEFRNGGS SSSERRPAAA EGATLARQGS VYSLTFDEFQ SALAGGGGGG 60 GGGGGSGFGK DFGSMNMDEL LRSIWTAEES QAMASASGSA AGVGVAVGAP PTSLQRQGSL 120 TLPRTLSAKT VDEVWRNLVR DEPPPVGAAD GGEIPPQRQS TLGEMTLEEF LVRAGVVREN 180 PPAAPHVPPP MPPRPVQVVP KTTAFLGNFP GANDAGAAAL GFAPLGMGDP ALGNGLMPRA 240 VPVGLPGAAV SMQAAVNQFD SGLDKGNSDL SSPTEPMPYS FEGLVRGRRN GGGVEKVVER 300 RQRRMIKNRE SAARSRARKQ AYTMELEAEV QKLKEMNKEL ERKQAEIMEM QKNEVEEMIK 360 DPFGRRKRLC LRRTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence Send to blast

MLTDRWGGRR EAMEFRNGGS SSSERRPAAA EGATLARQGS VYSLTFDEFQ SALAGGGGGG  60
GGGGGSGFGK DFGSMNMDEL LRSIWTAEES QAMASASGSA AGVGVAVGAP PTSLQRQGSL  120
TLPRTLSAKT VDEVWRNLVR DEPPPVGAAD GGEIPPQRQS TLGEMTLEEF LVRAGVVREN  180
PPAAPHVPPP MPPRPVQVVP KTTAFLGNFP GANDAGAAAL GFAPLGMGDP ALGNGLMPRA  240
VPVGLPGAAV SMQAAVNQFD SGLDKGNSDL SSPTEPMPYS FEGLVRGRRN GGGVEKVVER  300
RQRRMIKNRE SAARSRARKQ AYTMELEAEV QKLKEMNKEL ERKQAEIMEM QKNEVEEMIK  360
DPFGRRKRLC LRRTLTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269\|PubMed:10611387}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00087	SELEX	Transfer from AT1G49720	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA). {ECO:0000269\|PubMed:10611387}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK065873	0.0	AK065873.1 Oryza sativa Japonica Group cDNA clone:J013049N23, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015612550.1	0.0	bZIP transcription factor TRAB1-like
Swissprot	Q6ZDF3	1e-115	TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBL	A0A0E0M203	0.0	A0A0E0M203_ORYPU; Uncharacterized protein
STRING	OPUNC09G11090.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	8e-38	ABRE binding factor 4

Publications ? help Back to Top
Kagaya Y,Hobo T,Murata M,Ban A,Hattori T Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] Kobayashi Y, et al. Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] Kobayashi F,Maeta E,Terashima A,Takumi S Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]