PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G19800.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 298aa    MW: 31569.9 Da    PI: 4.6317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G19800.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.64.6e-1185136156
              AP2   1 sgykGVrwdkkrgr.WvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      ++y+GVr +  +g  +vAeI+ p+       r +lg+f+tae+ a a++aa++ l+ge
  OPUNC06G19800.1  85 TKYRGVRVR--WGTrYVAEIHNPT----GaGRLWLGTFDTAEQGAWAYDAAARVLRGE 136
                      69****864..5544*******95....258************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.85E-1985142No hitNo description
PfamPF008471.1E-485136IPR001471AP2/ERF domain
SMARTSM003802.9E-1986150IPR001471AP2/ERF domain
PROSITE profilePS5103217.64986143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-2286143IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-1686143IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MDPVEIGEAM KDLLVDYSQQ STRLAVKPPL VAAVGGGVAV GEVLVTLLVE GEVCVVPAVE  60
RRRWRRQAEA EDGEGEVWEE IDAETKYRGV RVRWGTRYVA EIHNPTGAGR LWLGTFDTAE  120
QGAWAYDAAA RVLRGEMAVT NFGDPAPTPS PLSVEMRSML AFFERACRER EVEGQRRGGR  180
GAAAAVVESG APAPAPLLFL PAPPPSSSDS SPVTVQVPVP PSSDAVSVLA PPSSDVAPVQ  240
VQLRRHLMKL HLLVDWDADA TPVPVLVAGV DLAAVEVPDV GAVAVGGVGA EANALRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025881953.12e-59calphotin
TrEMBLA0A0E0LDS00.0A0A0E0LDS0_ORYPU; Uncharacterized protein
STRINGOPUNC06G19800.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1378799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.19e-18ERF domain protein 12