PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G02780.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 589aa    MW: 62033.1 Da    PI: 7.5421
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G02780.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30241300159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  OPUNC06G02780.1 241 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQVQRCADDMSILITTYEGTHNHP 300
                      58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-32226300IPR003657WRKY domain
SuperFamilySSF1182902.88E-27234301IPR003657WRKY domain
PROSITE profilePS5081128.311236302IPR003657WRKY domain
SMARTSM007743.4E-37241301IPR003657WRKY domain
PfamPF031062.8E-27242300IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MKEEMIKGEK QLGTHEERLK AEVIKDSDPI SDGNFFKSLQ NISSTKKEDQ DDKLASTRAE  60
MGEVREENER LKTLLSRISH DYRSLQTHFY DVLQQGRAKK LPDSPANLPT DTDEPEFISL  120
RLGMSTSKCK DEDNNTIGEV KRSTEDFLKI KEGGLSLGLS DCRVGANNSE KLQPDMMTLS  180
PEGSFEDAKD DTAETTEQWP PSKMLKNLRS VGAEAEDDIA PQPQVKKARV SVRARCDAPT  240
MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA AGCPVRKQVQ RCADDMSILI TTYEGTHNHP  300
LSVSATAMAS TTSAAASMLS SGSSSTSLAA YPAASPALTF DASKPPVVGG RPFFLPTAAA  360
SITSTPSYPT ITLDLTSPAA ATSSHAAFSL SNRFSSSFTS SHAAARYPST GFTFSGSGPS  420
STPWPGYLSY GASLAAHPYN GGGGKSSPSF EAALSSINGS RQQGGGSAAL YQMQQKSAPG  480
AAAAAPSVIT DTIAKAITAD PSFHTALAAA ITSYVGKKGS PAATGGEDSK VGLKWGEHLG  540
LGLSQSPSTA KAMAAASSSS QMFLQPSLGL SGSTTSASTS PVANREQAH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-202413011776Probable WRKY transcription factor 4
2lex_A4e-202413011776Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126140.0CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643469.10.0probable WRKY transcription factor 72 isoform X2
TrEMBLA0A0E0L7R30.0A0A0E0L7R3_ORYPU; Uncharacterized protein
STRINGOPUNC06G02780.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-66WRKY DNA-binding protein 72