PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC04G15110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 370aa MW: 39773.3 Da PI: 5.9055 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.3e-11 | 171 | 229 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l++l+ l+se+ OPUNC04G15110.1 171 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTSEN 229 9************************************************9999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-18 | 167 | 231 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.139 | 169 | 232 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-11 | 171 | 226 | No hit | No description |
SuperFamily | SSF57959 | 2.74E-11 | 171 | 226 | No hit | No description |
Pfam | PF00170 | 1.5E-9 | 171 | 229 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.48E-22 | 172 | 221 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence Send to blast |
MDPAASASSS AAESSPSSLS LSSRDVAAMP DSPPRRAARH RRAQSEILLG AALPDDIAFD 60 ADLGVVGEVG GGGGDDYEEE EEDDEEEEME GAGGSRMFEM FLEAGGKLEP PEPTAPLPPP 120 PARPRHQHSM SMDGSTSLAS SAAGVAGRMG ADAKKAISDA KLAELALVDP KRAKRILANR 180 QSAARSKERK MRYIAELERK VQTLQTEATT LSAQLSMLQR DTTGLTSENS DLKIRVQTME 240 QQVRLQDALN DRLRDEIQQL KVATGQVNAN CGKVGNFGLS SFGGANPQGY QRSHIQSLLA 300 AQQLQQLQIH SQHQQQQMHL QHHHHLSTVQ QQLLQEGLPL PGDLKMKGIA VASHAQNTGA 360 SESHALRSEP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AL606627 | 0.0 | AL606627.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence. | |||
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015633411.1 | 1e-168 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 1e-84 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A0E0KSA8 | 0.0 | A0A0E0KSA8_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC04G15110.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 3e-67 | bZIP family protein |
Publications ? help Back to Top | |||
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