PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G34240.5
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 846aa    MW: 93731 Da    PI: 5.3856
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G34240.5genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.21.6e-12653677125
          G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                      kpr+rWtpeLHerFv+av++LGGse
  OPUNC02G34240.5 653 KPRMRWTPELHERFVDAVNKLGGSE 677
                      79*********************97 PP
2G2-like20.61e-067057252545
          G2-like  25 ekAtPktilelmkvkgLtleh 45 
                       kAtPk++ ++mkv+gLt++h
  OPUNC02G34240.5 705 TKATPKAVQKVMKVEGLTIYH 725
                      69*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF111071.8E-4510220No hitNo description
PfamPF111074.9E-16228353No hitNo description
SuperFamilySSF466891.49E-6650679IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.4E-18652725IPR009057Homeodomain-like
PfamPF002493.5E-6655682IPR001005SANT/Myb domain
SuperFamilySSF466891.49E-6708725IPR009057Homeodomain-like
PfamPF143791.2E-17763805IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    Send to blast
MGWAHETVAM EELLGLVRGF VDVLVLAGGH TSSGAAATWR SGDVKKALQW ALFFEEVFKN  60
LRDNGQYDGS ARELDAALVQ LTSSPNFPKG IEDIRSKTLS TARYLVVKHF LKTTSVENLG  120
AVLQAVVEMD MDGISASSER NVCQEYVQSI LDTNLPSLMR TKNARDVGHS TSSDEFCEES  180
LFMGNSQILL KELQKNLDSG SCISLAEKGL STLLKSMKKN SFGGAGSTSC TPATAQKAQI  240
VDKFILWKQW RAKCLSYLLD ERTIRIMSGA NLIFNAPKEQ WMGLFEPLKD SSQSGIVEVM  300
ELCLLGLVAR QWNSLIESFM SHTFSSFPIS KQYADLHQLL QGTTQDECQD KLLGFKEMDI  360
CEYATQSLES EPYILWLLPP VLTAAAMPPR SSLFKKYLVE IDKQLSEAAS KDRPTSTMNQ  420
LRNGKVPRYL SPAITVVPAL SEVAFPSFSE HRPSYIEREQ CGSSINSFDA STPMCMLASN  480
FTSDLYINNS ELPNGKLSSE SYAIDTSGCD SSLLPTQSLY KGNPSSLRMV YPKVSEQNSW  540
SQEPLPGPFV CPTSVDFFDQ QDMAIFDQQI QDNIAASPST NLAKQNEWFS SGTSLQYLES  600
SVSAGSVLKA VDATSTTPSN YPHCHAQRNT SNPPNFNELC SDNIASSNIA PTKPRMRWTP  660
ELHERFVDAV NKLGGSESWS LILCSSYHTF VLNFYGTVLF SQQETKATPK AVQKVMKVEG  720
LTIYHKYRTV HHRPELSDGE SAKSGQMDEI SSQPLKGMET TCEGLRVQIG LQKQLHEQLE  780
IQRKLQLQVE EHSKYLAMII AKQSESLRQL GALPRSLDAP TQVLDNRETC EGQAGDADSA  840
EQKPEK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0663820.0AK066382.1 Oryza sativa Japonica Group cDNA clone:J013064K05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0K6T20.0A0A0E0K6T2_ORYPU; Uncharacterized protein
STRINGOPUNC02G34240.50.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54942526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.14e-36phosphate starvation response 1