PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G08840.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 376aa    MW: 38960.4 Da    PI: 9.6856
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G08840.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822174.74.7e-5471671145
           DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaag 83 
                      gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr          ++ k+   +++++g
  OPUNC02G08840.1   7 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAIMG 100
                      689*******************************************************************666666555544444455666777 PP

           DUF822  84 ssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa....asllpvlsvlsl 145
                      +   + p s+l  +l  s  asp++sy++sp+ +ssfps+ s+++i++       +sl+p+l++ls+
  OPUNC02G08840.1 101 TKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITIGGGggegSSLIPWLKTLSS 167
                      777788888888999999************984689**********9987789999******99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.9E-608166IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MMNGGGGGGG RVPTWREREN NRRRERRRRA IAAKIYAGLR AYGNYTLPKH CDNNEVLKAL  60
CNEAGWTVEP DGTTYRKYWS LDRIEAAHVK KGLVKEAIMG TKGCKPPASE LADQLGRSPS  120
ASPCSSYQPS PRGTSSFPSS GSSSQITIGG GGGEGSSLIP WLKTLSSAGV GGGSSSSKFP  180
AHYSYFGGGS ISAPVTPPSG SPPRTPRLKT AAWEEYHHAS SVLPPWAAGA SYAYASSLPN  240
STPPSPRRKV AAAAGGGNDP AAWLAGFQIS SAGPSSPTYS LMAPPNPFGA AAASGSSSRR  300
MVMGTPGQSG TCSPVAAGDV QMVDAARREF AFGGEGGGGD KMTGLVKAWE GERIHEECGS  360
DDLELTLGSS MTRADR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-201177372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-201177372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-201177372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-201177372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0040700.0AP004070.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1705_E12.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624154.11e-151protein BZR1 homolog 4
SwissprotQ6EUF11e-153BZR4_ORYSJ; Protein BZR1 homolog 4
TrEMBLA0A0E0JXR80.0A0A0E0JXR8_ORYPU; Uncharacterized protein
STRINGOPUNC02G08840.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-57BES1/BZR1 homolog 4