PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G20800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 352aa MW: 37027.9 Da PI: 9.9298 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.2 | 4.1e-09 | 297 | 325 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 +r+rr++kNRe+A rsR+RK+a i e ++ ONIVA03G20800.1 297 RRQRRMIKNRESAARSRARKQADIMEMQK 325 79*********************999874 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-8 | 292 | 330 | No hit | No description |
Pfam | PF00170 | 1.8E-6 | 297 | 325 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.04E-5 | 297 | 326 | No hit | No description |
CDD | cd14707 | 6.24E-13 | 297 | 322 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 300 | 315 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MLTDRWGGRR EAMEFGNGGS SSSERRAAAE GATLARQGSV YSLTFDEFQS ALAGGGGGGG 60 GGSGFGKDFG SMNMDELLRS IWTAEESQAM ASASGSAAGV GVAVGAPPTS LQRQGSLTLP 120 RTLSAKTVDE VWRNLVRDEP PPVGAADGGD MPPQRQSTLG EMTLEEFLVR AGVVRENPPA 180 APPPVPPPMP PRPVPVVPKT TAFLGNFPGA NDAGAAALGF APLGMGDPAL GNGLMPRAVP 240 VGLPGAAVAM QTAVNQFDSG EKGNSDLSSP TEPMPYSFEG LVRGRRNGGG VEKVVERRQR 300 RMIKNRESAA RSRARKQADI MEMQKNEVEE MIKDPFGRRK RLCLRRTLTG PW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015612550.1 | 0.0 | bZIP transcription factor TRAB1-like | ||||
Swissprot | Q6ZDF3 | 1e-100 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | A0A0E0GN94 | 0.0 | A0A0E0GN94_ORYNI; Uncharacterized protein | ||||
STRING | ONIVA03G20800.1 | 0.0 | (Oryza nivara) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.2 | 2e-33 | ABRE binding factor 4 |
Publications ? help Back to Top | |||
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