PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G39710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 133aa MW: 14177.9 Da PI: 9.8288 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43 | 9.8e-14 | 68 | 117 | 1 | 50 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 e+e ++++r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk + OGLUM02G39710.1 68 EEEERKTIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRHCK 117 678899************************************88885443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 66 | 118 | No hit | No description |
Pfam | PF00170 | 5.9E-11 | 68 | 118 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 6.7E-8 | 68 | 132 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.381 | 70 | 114 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.58E-14 | 72 | 121 | No hit | No description |
SuperFamily | SSF57959 | 2.74E-10 | 72 | 118 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MAEQLGGVGS PQLSLSSCSS FLSISSAGTS AADGAPHLSL GVGGAEELDL LLQVGIGGGG 60 GGGGGDEEEE ERKTIRMMKN RESALRSRAR KRAYVQELEK EVRRLVNENL KLKRHCKQQP 120 TNKQSSHRRS SST |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK061086 | 0.0 | AK061086.1 Oryza sativa Japonica Group cDNA clone:006-206-G05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015623884.1 | 5e-55 | protein FD | ||||
TrEMBL | A0A0D9Z0P5 | 6e-89 | A0A0D9Z0P5_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM02G39710.1 | 1e-89 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-10 | bZIP family protein |