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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OBART09G18940.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 477aa MW: 54401.8 Da PI: 4.9525 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OBART09G18940.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 174.4 | 3.3e-54 | 6 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv++yLk+k++g k+el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v
OBART09G18940.1 6 LPPGFRFHPTDEELVNYYLKRKIHGLKIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV 98
79****************************.99**************84335556888************************************ PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g+++g+kktLv+y+grap+g++tdWvmheyrl
OBART09G18940.1 99 VHQhGGRAIGMKKTLVYYRGRAPQGVRTDWVMHEYRL 135
99978899***************************98 PP
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2 | NAM | 173.4 | 6.9e-54 | 266 | 393 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv++yLk+kv+g +++l ++i+evd+yk+ePw+L+ k + ++++ewyfF +rd+ky++g r+nrat++gyWk+tgkd+++
OBART09G18940.1 266 LPPGFRFHPTDEELVNYYLKRKVHGLSIDL-DIIPEVDLYKCEPWELEeKsFLPSKDSEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRRI 358
79****************************.99**************84345566899************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g+kktLv+ykgrap+g +t+Wvmheyr+
OBART09G18940.1 359 NY-QNRSIGMKKTLVYYKGRAPQGIRTSWVMHEYRI 393
*9.8899***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LKIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVVH QHGGRAIGMK KTLVYYRGRA 120 PQGVRTDWVM HEYRLDDKDC EDTMPIQDTY ALCRVFKKNA ICTEVEELQG QCSMALLEGA 180 CQQLLASGGG GSQEQYETPS PPDVPVGSTS GGADADAEAE DDPDKDDSWM QFISDDAWCS 240 STADGGAEES TSCEEANWEA MAPVGLPPGF RFHPTDEELV NYYLKRKVHG LSIDLDIIPE 300 VDLYKCEPWE LEEKSFLPSK DSEWYFFGPR DRKYPNGCRT NRATRAGYWK STGKDRRINY 360 QNRSIGMKKT LVYYKGRAPQ GIRTSWVMHE YRIEESECEN AMGIQDSYAL CRIFKKNVVL 420 GEFDKKGECS SSQAKGNEEQ VTDFGDAGQS SGANENDKDN SWMQFIAEDL WCTNKLK
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-52 | 1 | 417 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-52 | 1 | 417 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-52 | 1 | 417 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-52 | 1 | 417 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swm_B | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swm_C | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swm_D | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swp_A | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swp_B | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swp_C | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
3swp_D | 3e-52 | 1 | 417 | 13 | 170 | NAC domain-containing protein 19 |
4dul_A | 3e-52 | 1 | 417 | 10 | 167 | NAC domain-containing protein 19 |
4dul_B | 3e-52 | 1 | 417 | 10 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728059 | 1e-175 | KJ728059.1 Zea mays clone pUT6205 NAC transcription factor (NAC121) mRNA, partial cds. |