PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART01G38510.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 230aa MW: 24711.3 Da PI: 6.5773 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.7e-15 | 148 | 200 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + +r++r++kNRe+A rsR+RK+a+i+eLe v +Le+eN ++ ke ee ++ OBART01G38510.2 148 AMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQK 200 689*************************************9998877655444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-8 | 146 | 210 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-14 | 148 | 206 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.657 | 148 | 212 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.99E-20 | 150 | 200 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-13 | 151 | 209 | No hit | No description |
SuperFamily | SSF57959 | 7.5E-11 | 151 | 198 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 153 | 168 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MNVEEILRGI YADMPTPALP LVGGDRPMSP LPVPDVAAAP RTAEEVWKEI TGAGVAAAAG 60 GVVPPAAAAA AAPAVVAGAG AGTGAEMTLE DFLAREGAVK EDEAVVTDPS AAKGQVVMGF 120 LNGAEVTGGV TGGRSRKRHL MDPMDRAAMQ RQKRMIKNRE SAARSRERKQ AYIAELESLV 180 TQLEEENAKM FKEQEEQHQK RLKELKEMVV PVIIRKTSAR DLRRTNSMEW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK067919 | 0.0 | AK067919.1 Oryza sativa Japonica Group cDNA clone:J013123H12, full insert sequence. | |||
GenBank | GQ904238 | 0.0 | GQ904238.1 Oryza sativa Japonica Group ABA responsive element binding factor 1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015612904.1 | 1e-163 | bZIP transcription factor 12-like | ||||
Swissprot | Q0JHF1 | 1e-164 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | I1NTP5 | 1e-163 | I1NTP5_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA01G0323500.1 | 1e-163 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 5e-33 | G-box binding factor 4 |
Publications ? help Back to Top | |||
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