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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf14929g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
WRKY |
Protein Properties |
Length: 332aa MW: 37389.7 Da PI: 7.9305 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf14929g00007.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.5 | 5.6e-33 | 187 | 244 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vk+s+fpr+YYrCt+++C+vkk+vers edp++v++tYeg+Hnh+
Niben101Scf14929g00007.1 187 EDGYRWRKYGQKSVKNSPFPRNYYRCTTQKCNVKKRVERSYEDPSIVITTYEGQHNHH 244
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MSNNPFYHDY MGTEGINTFP SFGENPTSDY DHTPPNNIQI PHHQFVPSSY MTLTECLHSS 60 MDYNTLSNAF GMSCSSSEVV CPQNDRHDYS SRKSSVVSST EPALDSPLEG TRVEIPPTTN 120 SSISSTSNEA GGEEDSSKSK KLMQGKEYHE EGDDKSKKES KAKKKGEKKP KEPRFAFMTK 180 SEIDNLEDGY RWRKYGQKSV KNSPFPRNYY RCTTQKCNVK KRVERSYEDP SIVITTYEGQ 240 HNHHCPATLR GNAASMLSPS FLSSSHLLPN FPPNIFAHML NPTSNQNLLI ILPIIIINSK 300 VKNMPHVSIN LSHPSHAYHN FNSMVSGLEF RP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |