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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Niben101Scf11491g01002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB |
Protein Properties |
Length: 295aa MW: 33379.6 Da PI: 7.9084 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf11491g01002.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 62.1 | 1.1e-19 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd llv+++ q+G g+W+ +a++ g++Rt+k+c++rw++yl
Niben101Scf11491g01002.1 24 RGPWTVEEDSLLVNYISQHGEGRWNMVAHRAGLKRTGKSCRLRWLNYL 71
89********************************************97 PP
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2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+ E++l+++++ +lG++ W++Ia++++ gRt++++k++w++
Niben101Scf11491g01002.1 77 RGNLTPHEQLLILELHSKLGNR-WSKIAQYLP-GRTDNEIKNYWRT 120
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
METDMSFLSK SSSSSSDGEI GLRRGPWTVE EDSLLVNYIS QHGEGRWNMV AHRAGLKRTG 60 KSCRLRWLNY LKPDVKRGNL TPHEQLLILE LHSKLGNRWS KIAQYLPGRT DNEIKNYWRT 120 RVQKQARHLK IDSKSAAFQH MIRCLWIPRL LQKIQGSSAI PSIQTSQSTS LVDSKYGPLN 180 ITEITQTPQV LSLENKSISS SCCSSSSTSS ESMSIYKSAN IISECPKLPP REMGDSELNT 240 FVNTHFPFDD NSYDMETFIS ETGIFLTNYD QTVGGENNLM GGDILAYSFW SMDQF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription repressor of phosphate (Pi) starvation-induced genes. Regulates negatively Pi starvation responses via the repression of gibberellic acid (GA) biosynthesis and signaling. Modulates root architecture, phosphatase activity, and Pi uptake and accumulation. {ECO:0000269|PubMed:19529828}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid (PubMed:16463103). Induced reversibly in response to phosphate (Pi) deficiency but repressed in the presence of Pi, specifically in the leaves. Availability of Pi increases with decreased levels (PubMed:19529828). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:19529828}. |