PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf11410g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 96aa MW: 11320.9 Da PI: 10.9285 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.9 | 1.3e-12 | 3 | 94 | 17 | 106 |
NAM 17 eyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ++Lk+ ++g++++ e +++++iy Pw++ + ++eek yfF++ +k++++ +r +r+ ++g+Wka+ ++++ kg++ Niben101Scf11410g00003.1 3 NFLKRFLKGETFPSEYPFQHAHIYGDrPPWEIFgADSSSEEKVRYFFTQLKKHKSEHTRVRRTCTNGTWKAQTGIVPIKNGKGTV 87 89*********999778******986478***745656666777******************9999*****9999*****99999 PP NAM 100 vglkktL 106 +g ++ + Niben101Scf11410g00003.1 88 IGFRRNF 94 9999875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.303 | 1 | 96 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-11 | 3 | 94 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence Send to blast |
MINFLKRFLK GETFPSEYPF QHAHIYGDRP PWEIFGADSS SEEKVRYFFT QLKKHKSEHT 60 RVRRTCTNGT WKAQTGIVPI KNGKGTVIGF RRNFNR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019264488.1 | 1e-58 | PREDICTED: NAC domain-containing protein 62-like | ||||
TrEMBL | A0A314L5J4 | 3e-57 | A0A314L5J4_NICAT; Nac domain-containing protein 78 | ||||
STRING | XP_009617292.1 | 1e-55 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |