PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf11251g00003.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 102aa MW: 12006.8 Da PI: 10.4205

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf11251g00003.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.6	1.1e-12	57	93	3	39
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 +lk+ rr +NR++A+rsR +K ++i eLe+kvk L Niben101Scf11251g00003.1 57 DLKKLRRTVSNRLSAQRSRIKKTEYITELEKKVKDLR 93 79********************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.898	57	92	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.41E-9	58	94	No hit	No description
Pfam	PF00170	8.9E-11	58	93	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.5E-10	59	92	No hit	No description
PROSITE pattern	PS00036	0	62	77	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MEDKRKRSEL ELALSLKSPT DNQDELSANR RTVPLTLDQA IDFELNKLGR NIDSDVDLKK 60 LRRTVSNRLS AQRSRIKKTE YITELEKKVK DLRVPRSFFL FE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783967.1	7e-54	PREDICTED: basic leucine zipper 19
Refseq	XP_016471095.1	7e-54	PREDICTED: basic leucine zipper 19-like
TrEMBL	A0A1S4A3A8	2e-52	A0A1S4A3A8_TOBAC; basic leucine zipper 19-like
TrEMBL	A0A1U7WVP3	2e-52	A0A1U7WVP3_NICSY; basic leucine zipper 19
STRING	XP_009783967.1	3e-53	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7615	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	4e-08	bZIP family protein