PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf07465g01009.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 475aa    MW: 51642.8 Da    PI: 6.8621
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf07465g01009.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-10327385563
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  ++  l+k   +l s +
  Niben101Scf07465g01009.1 327 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTEATTLSTQVTILQKDFTELSSLN 385
                               9***********************************************99999998866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-15323387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.036325388IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.29E-11327380No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-11327384No hitNo description
PfamPF001704.4E-10327385IPR004827Basic-leucine zipper domain
CDDcd147039.54E-21328379No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MAQSNSKPPT SHSFGVGASH VRSLSQPSIF LNNCLPPLSP LPPSELSIVL ANTSLKDTSM  60
EEVDVNCQVP KAVSNFVRES ALWGSDGLPP RKGHRRSNSD VPLGFSDMIQ SSPQLMPISG  120
QRISGRAVNL GDSSGREKTI DLQKQPMGLS SNGRIDVEGI GERKSRGEVT DELLFSYMNL  180
ENIEALNSSG TEDRDKGSMV SCTKVSGNES SNNEAESLLK GSGVSSQLTS LREGIQRSAD  240
ADIAPTTRHL RSLSMDSAIG GFHYGDESPK LPASLINHSG QLSPSNSGNE SSSQHNFDFG  300
NAEFCEAEVK KIMADERLAE IAVSDPKRAK RILANRQSAA RSKERKLRYI SELEYKVQKL  360
QTEATTLSTQ VTILQKDFTE LSSLNSELKF RVQAMEQQTQ LRDALHEALT SEVQRLKLAA  420
GELREEGRLP NSMIQHMPVK HNVFPMQREQ PSQIQQLSVG KPTTASSASA TPASA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798752.10.0PREDICTED: uncharacterized protein LOC104244929
RefseqXP_009798753.10.0PREDICTED: uncharacterized protein LOC104244929
RefseqXP_009798754.10.0PREDICTED: uncharacterized protein LOC104244929
TrEMBLA0A1U7Y3P60.0A0A1U7Y3P6_NICSY; uncharacterized protein LOC104244929
STRINGXP_009798752.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.38e-91bZIP family protein