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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf05363g02005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB |
Protein Properties |
Length: 374aa MW: 42114 Da PI: 9.4466 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf05363g02005.1 | genome | BTI | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 59 | 1.1e-18 | 40 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd++l ++v+++G ++W++I++++ gR++k+c++rw +
Niben101Scf05363g02005.1 40 KGPWSAEEDKILTKLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 85
79*****************************9.***********985 PP
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2 | Myb_DNA-binding | 26.8 | 1.2e-08 | 94 | 122 | 3 | 32 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg 32
++++ Ed+ ++ a++++G++ W+tIar ++
Niben101Scf05363g02005.1 94 PFSQTEDDTILAAHAKYGNR-WATIARLLP 122
79******************.*******99 PP
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3 | Myb_DNA-binding | 47.4 | 4.6e-15 | 140 | 180 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+eEd++l ++v+++G ++W++I++++ gR++k+c++rw +
Niben101Scf05363g02005.1 140 AEEDKILTKLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 180
69************************9.***********985 PP
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4 | Myb_DNA-binding | 52.9 | 8.2e-17 | 189 | 231 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++
Niben101Scf05363g02005.1 189 PFSQTEDDTILAAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 231
79******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MEFFNRCSTS TTSSSCESSS SESSLSGKTP RDGKKSERIK GPWSAEEDKI LTKLVERYGA 60 RNWSLISKYI KGRSGKSCRL RWCNQLSPNV QHRPFSQTED DTILAAHAKY GNRWATIARL 120 LPESLEFDTK KTYFSSSSXA EEDKILTKLV ERYGARNWSL ISKYIKGRSG KSCRLRWCNQ 180 LSPNVQHRPF SQTEDDTILA AHAKYGNRWA TIARLLPGRT DNAVKNHWNS TLKRRYQQLL 240 QQHQQNQSSV VFSDVKINGS ASGSGPCMDY MNANDSPIRG NFPINNVVTT NCSSEFDDPM 300 TTLSLAPPGM GGDELPEKKT ESFPAGFWDV MRDLPEKKME SFPAGFWDVM RDVIAKEVRE 360 YVASSFSGAS TGFP
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