PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf02947g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 133aa MW: 15627.2 Da PI: 10.3963 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.3 | 2e-12 | 12 | 96 | 3 | 84 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWk 84 +G+rFhP + el+ ++Lk+ ++g++l+ e +++vdiy Pw++ ++ ++ eek yf ++ +k++++ +r +r+ + g k Niben101Scf02947g00003.1 12 MGVRFHPIEAELI-NFLKRFLKGEPLPSEFPnFQHVDIYGDqPPWEIFgANSDHpEEKVRYFLTRLKKQKSEYTRVRRTCAMGHGK 96 7************.9**********7774445*******87368***733333324445599999999999999****88777544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.15E-10 | 10 | 94 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.908 | 10 | 133 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-5 | 12 | 105 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MSSLPVRREC IMGVRFHPIE AELINFLKRF LKGEPLPSEF PNFQHVDIYG DQPPWEIFGA 60 NSDHPEEKVR YFLTRLKKQK SEYTRVRRTC AMGHGKSKPK VFLSRMAKEQ WLGLEEVSSF 120 KVVVKKERTI KFG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009801092.1 | 1e-54 | PREDICTED: NAC domain-containing protein 90-like | ||||
Refseq | XP_016510918.1 | 1e-54 | PREDICTED: NAC domain-containing protein 53-like | ||||
TrEMBL | A0A1S4DC45 | 3e-53 | A0A1S4DC45_TOBAC; NAC domain-containing protein 53-like | ||||
TrEMBL | A0A1U7YAE3 | 3e-53 | A0A1U7YAE3_NICSY; NAC domain-containing protein 90-like | ||||
STRING | XP_009801092.1 | 6e-54 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.1 | 8e-07 | NAC domain containing protein 52 |