PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf02844g03014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 308aa    MW: 34189.7 Da    PI: 7.3631
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf02844g03014.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-14108159155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  Niben101Scf02844g03014.1 108 QRMTHIAVERNRRKQMNEHLAVLRSLMPQS---YVQRGDQASIVGGAIEFVKELE 159
                               79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.25E-13106163No hitNo description
Gene3DG3DSA:4.10.280.101.2E-13106161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-17106174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.301107158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-11108159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-10113164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MALEALSSNE LLNFIIYDTI SATPFSLDPS TSENAASATL LLDHENDLLT TLPQHFCGHE  60
QHYSTSSVPE ITTTTRREKN LAVAQGGGRK KRRRRPKVCK NKEEAENQRM THIAVERNRR  120
KQMNEHLAVL RSLMPQSYVQ RGDQASIVGG AIEFVKELEH ILQSLEAQKF LLLQQGGGDG  180
EGPRETTAAG GASGKTPFAQ FFSYPQYTSK NKAATADIEV TLIETHANVR ILSRRRFRQL  240
SKLVAAFQSL FLTVLHLNVT TLDPLVFYSI SSKVEEGCQL NSADDIAGAV HHMLRIIEEE  300
ATTLSCQP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18894RKKRRRR
28994KKRRRR
3108119RMTHIAVERNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018622054.10.0PREDICTED: transcription factor bHLH71 isoform X1
SwissprotQ56XR01e-79BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A1S3YWI71e-180A0A1S3YWI7_TOBAC; transcription factor bHLH71-like
TrEMBLA0A1U7V4T91e-180A0A1U7V4T9_NICSY; transcription factor bHLH71-like
STRINGXP_009631535.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56322436
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46690.18e-81beta HLH protein 71
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]