PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf02844g03014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 308aa MW: 34189.7 Da PI: 7.3631 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3e-14 | 108 | 159 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ Niben101Scf02844g03014.1 108 QRMTHIAVERNRRKQMNEHLAVLRSLMPQS---YVQRGDQASIVGGAIEFVKELE 159 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.25E-13 | 106 | 163 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.2E-13 | 106 | 161 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.24E-17 | 106 | 174 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.301 | 107 | 158 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-11 | 108 | 159 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.0E-10 | 113 | 164 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MALEALSSNE LLNFIIYDTI SATPFSLDPS TSENAASATL LLDHENDLLT TLPQHFCGHE 60 QHYSTSSVPE ITTTTRREKN LAVAQGGGRK KRRRRPKVCK NKEEAENQRM THIAVERNRR 120 KQMNEHLAVL RSLMPQSYVQ RGDQASIVGG AIEFVKELEH ILQSLEAQKF LLLQQGGGDG 180 EGPRETTAAG GASGKTPFAQ FFSYPQYTSK NKAATADIEV TLIETHANVR ILSRRRFRQL 240 SKLVAAFQSL FLTVLHLNVT TLDPLVFYSI SSKVEEGCQL NSADDIAGAV HHMLRIIEEE 300 ATTLSCQP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 94 | RKKRRRR |
2 | 89 | 94 | KKRRRR |
3 | 108 | 119 | RMTHIAVERNRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018622054.1 | 0.0 | PREDICTED: transcription factor bHLH71 isoform X1 | ||||
Swissprot | Q56XR0 | 1e-79 | BH071_ARATH; Transcription factor bHLH71 | ||||
TrEMBL | A0A1S3YWI7 | 1e-180 | A0A1S3YWI7_TOBAC; transcription factor bHLH71-like | ||||
TrEMBL | A0A1U7V4T9 | 1e-180 | A0A1U7V4T9_NICSY; transcription factor bHLH71-like | ||||
STRING | XP_009631535.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5632 | 24 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46690.1 | 8e-81 | beta HLH protein 71 |
Publications ? help Back to Top | |||
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