PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf02188g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 129aa MW: 14603.4 Da PI: 10.4267 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.6 | 7.8e-11 | 98 | 118 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK vk++++p Niben101Scf02188g00002.1 98 LDDGYRWRKYGQKAVKNNNYP 118 59*****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 16 | No hit | No description |
Gene3D | G3DSA:2.20.25.80 | 1.8E-12 | 83 | 118 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-9 | 90 | 119 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.277 | 93 | 118 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0055 | 98 | 127 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.6E-7 | 99 | 118 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence Send to blast |
MENRSITMVH YGSTSCARTI SDSFSNSTNI GYNSMNGWTS GLKTEISNST AREQNSPVGM 60 VSSENHTTTI ISSLKKKGDK KIKKPRFAFQ TRSQVDILDD GYRWRKYGQK AVKNNNYPSF 120 TIMNENFKL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009788059.1 | 3e-55 | PREDICTED: probable WRKY transcription factor 43 | ||||
Refseq | XP_016437762.1 | 3e-55 | PREDICTED: probable WRKY transcription factor 43 | ||||
TrEMBL | A0A1S3XCY2 | 7e-54 | A0A1S3XCY2_TOBAC; probable WRKY transcription factor 43 | ||||
TrEMBL | A0A1U7XM87 | 7e-54 | A0A1U7XM87_NICSY; probable WRKY transcription factor 43 | ||||
STRING | XP_009788059.1 | 1e-54 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2204 | 24 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 1e-18 | WRKY DNA-binding protein 75 |