PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf01970g06013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 331aa    MW: 36117.4 Da    PI: 7.3429
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf01970g06013.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer51.91.8e-162578458
               ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                              + Y eC +N      ++ +DGC  f p  g  g+++al+C  CgC R+FHRr  +
  Niben101Scf01970g06013.1 25 AIYGECIRNRLTGAMTYNIDGCLAFAPG-GPPGSTQALRCQTCGCSRSFHRRLDT 78
                              78*************************8.8889******************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.7E-152675IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152316.5062776IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257743.0E-82775IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MANNNMLRAN SAARANNNRP VISAAIYGEC IRNRLTGAMT YNIDGCLAFA PGGPPGSTQA  60
LRCQTCGCSR SFHRRLDTNN LPPPAASRQI YDDARLVYSP PVFTAPSSTI IPPPPPPPHT  120
QPDAPAADVN MESSNVNANS LTESFRVTVV ENISTGSVNL QCVRSPVSAT RGSVKGKEVM  180
DAEIAKTFAS LPPLPPRRQG SKSPAMSGKR KSNISSSDVV SEIMKDKVWL LTEELEWLNM  240
KNKEEEDKNN NNKKQLEETT SNVSRREPIF DHTIERLMNN RAEVLKTMNH QFLVIATSLT  300
ARRELGDQSP CSTGTSNTEL ENDESSSDSD S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A314L9L80.0A0A314L9L8_NICAT; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533648
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.11e-11homeobox protein 21