PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01970g06013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 331aa MW: 36117.4 Da PI: 7.3429 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 51.9 | 1.8e-16 | 25 | 78 | 4 | 58 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + Y eC +N ++ +DGC f p g g+++al+C CgC R+FHRr + Niben101Scf01970g06013.1 25 AIYGECIRNRLTGAMTYNIDGCLAFAPG-GPPGSTQALRCQTCGCSRSFHRRLDT 78 78*************************8.8889******************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 2.7E-15 | 26 | 75 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 16.506 | 27 | 76 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 3.0E-8 | 27 | 75 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MANNNMLRAN SAARANNNRP VISAAIYGEC IRNRLTGAMT YNIDGCLAFA PGGPPGSTQA 60 LRCQTCGCSR SFHRRLDTNN LPPPAASRQI YDDARLVYSP PVFTAPSSTI IPPPPPPPHT 120 QPDAPAADVN MESSNVNANS LTESFRVTVV ENISTGSVNL QCVRSPVSAT RGSVKGKEVM 180 DAEIAKTFAS LPPLPPRRQG SKSPAMSGKR KSNISSSDVV SEIMKDKVWL LTEELEWLNM 240 KNKEEEDKNN NNKKQLEETT SNVSRREPIF DHTIERLMNN RAEVLKTMNH QFLVIATSLT 300 ARRELGDQSP CSTGTSNTEL ENDESSSDSD S |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A314L9L8 | 0.0 | A0A314L9L8_NICAT; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15336 | 4 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 1e-11 | homeobox protein 21 |