 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Niben101Scf00238g02005.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
MYB |
Protein Properties |
Length: 229aa MW: 26658.9 Da PI: 7.1651 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Niben101Scf00238g02005.1 | genome | BTI | - |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd++l v+++G ++W+ +++ g+ R++k+c++rw +yl
Niben101Scf00238g02005.1 14 RGAWSEEEDDKLRAFVEKYGHPNWRQLPKYAGLMRCGKSCRLRWMNYL 61
89********************************************97 PP
|
2 | Myb_DNA-binding | 52.8 | 9.3e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+ + eE+el+++++++lG++ W++Ia++++ gR+++++k+ w+ +
Niben101Scf00238g02005.1 67 KGNYSHEEEELIIKLHNELGNR-WSAIAKKLP-GRSDNDIKNQWHAH 111
7899******************.*********.***********976 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MVRTPSVDKH GIKRGAWSEE EDDKLRAFVE KYGHPNWRQL PKYAGLMRCG KSCRLRWMNY 60 LRPGLKKGNY SHEEEELIIK LHNELGNRWS AIAKKLPGRS DNDIKNQWHA HLKKRANIYT 120 NLSTSTEQFT ESSQSQQEAG CDMRESLSAS VNAADPSIEV SSSDLSKLYS NCSLLNGMDW 180 IEEDHIRSMQ QLSNIKPLPE DNFFNFCWTN PIDNFQTEPL DNFWRQPFF
|