PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00536.1.p
Common NameLOC105949218, MIMGU_mgv1a010772mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 303aa    MW: 33928.1 Da    PI: 6.6047
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00536.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.5e-1470121155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  Migut.O00536.1.p  70 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 121
                       79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-1668138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-1368123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.44E-1368125No hitNo description
PROSITE profilePS5088815.19969120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-1170121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-1075126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MALETLSSSE LLNFIMYDST VSAPTPFESS EAAETRQSHP PPATETAVQG RKKRRRRPKV  60
CKNKEEAETQ RMTHIAVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV GGAIEFVKEL  120
EHILQSLEAK KFTLLEQQGN NNNTNINNNI NNNNSNNNNE DNYNPDQEIS DDNSSIKQVS  180
PFAQFFAYPQ FSCSNNQMGN KYTSQSKAAI ADIEVTLIET HANIRILSRR RLRQLSKIVA  240
SFHSVSLTIL HLNVTTLDLL VLYSISAKVE EGCQLSSADE IAGAVHHMLR IIEEEAILGC  300
QS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15056RKKRRRR
25156KKRRRR
37081RMTHIAVERNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00536.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2575273e-74KP257527.1 Salvia miltiorrhiza clone 94 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827967.10.0PREDICTED: transcription factor bHLH71-like
SwissprotQ56XR06e-76BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A022PX060.0A0A022PX06_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56322436
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-64bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]