PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02543.1.p
Common NameLOC105959101, MIMGU_mgv1a010346mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 316aa    MW: 34072.9 Da    PI: 8.1564
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02543.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00073129151123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C+ C+++F++   L  H  +H
  Migut.N02543.1.p 129 YECKTCNRTFPSFQALGGHRASH 151
                       99**********99999998887 PP
2zf-C2H211.90.00071224246123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++Cg  F +   L  H+r+H
  Migut.N02543.1.p 224 HECSICGSEFASGQALGGHMRRH 246
                       78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.99E-6126157No hitNo description
PfamPF139124.3E-13128153IPR007087Zinc finger, C2H2
SMARTSM003550.052129151IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.843129156IPR007087Zinc finger, C2H2
PROSITE patternPS000280131151IPR007087Zinc finger, C2H2
SuperFamilySSF576671.04E-5221251No hitNo description
PfamPF139123.5E-11224248IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.803224251IPR007087Zinc finger, C2H2
SMARTSM003550.031224246IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280226246IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MMKMEISEDF SGSNDQVIVK GKRTKRPRPS SSTSSSIAGG GEFYNNNNNS VLMVSSPATT  60
SSAMSTEEDE DMANCLILLA RGTTSPPQLV YEETKAAPAA AEEKKFRSRK FTEMAAAAAT  120
GKVGGSYVYE CKTCNRTFPS FQALGGHRAS HKRPKPTADY DQKKSPPAAP PPDVEEDGQF  180
ITGAHNTTLI TPPPPSTTTT TQLLPPNNKS FHHDYNHHNK PKIHECSICG SEFASGQALG  240
GHMRRHRPAA PSNTNTTTRT GGASTETDSS SPKNMLALDL NLPAPPEDDK FHQFPTKQQN  300
RLVFSTAAMV VDCHY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12428KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02543.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838585.10.0PREDICTED: zinc finger protein ZAT5
TrEMBLA0A022R6N50.0A0A022R6N5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.14e-36C2H2 family protein