PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00977.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 312aa    MW: 35424.9 Da    PI: 5.1771
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00977.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.7e-132669146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg  + +E+ l+++++++lG++ W+ Ia+ ++ gRt++++k+ w++
  Migut.N00977.1.p 26 RGTISLDEENLIIELHALLGNR-WSQIAAQLP-GRTDNEIKNLWNS 69
                      677899****************.*********.*********9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500904.426120IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.4E-5419IPR009057Homeodomain-like
SuperFamilySSF466895.7E-19679IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-232075IPR009057Homeodomain-like
PROSITE profilePS5129423.4422175IPR017930Myb domain
SMARTSM007175.3E-122573IPR001005SANT/Myb domain
PfamPF002495.7E-122669IPR001005SANT/Myb domain
CDDcd001671.09E-83071No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MKLGLQRCGK SCRLRWINYL RPDLKRGTIS LDEENLIIEL HALLGNRWSQ IAAQLPGRTD  60
NEIKNLWNSS LKKKLRSKGI DPNTHKPLSE ILLIDNDEKS SQEITTTADE KPPSNILLPY  120
INNNNNSNND DNGIFGLNNN NNRFVVSSHS DNFPGFLSYE NILSTNPDSS IFFNVVSNSN  180
NSNISSNTSN NNNTNNNNNP ASPFSMKFDQ RWDSCKISDD QFSRTNGSFF EKEDYDQSHH  240
TNNNISTSGG EIISELYMQQ TPFLLGNYEA QFANEGSLLM SQQQQLEQQS LLQDEEIYSK  300
LHFQRLFGHF S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-2077540108B-MYB
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17076LKKKLRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00977.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR7800803e-71KR780080.1 Rehmannia glutinosa R2R3-MYB protein (MYB4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839817.10.0PREDICTED: transcription factor MYB86-like
TrEMBLA0A022R6R00.0A0A022R6R0_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.35e-40myb domain protein 55