PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00806.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 367aa    MW: 41769.5 Da    PI: 4.691
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00806.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM120.41.7e-37151412127
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       ppG+rF P+deel++eyL kk++++++++ + i+ vd yk++P +   k  + +++ewyfF+ r+kk+++g+r+ r++++gyW+at  d++++
  Migut.N00806.1.p  15 PPGYRFAPKDEELITEYLVKKINNQPIPI-DDIRVVDFYKYNPDTYSgKYPTLGDNEWYFFTLRNKKNPKGSRPDRTANNGYWRATTADTPIK 106
                       9****************************.67**************9555556999************************************* PP

               NAM  94 skkgelvglkktLvfykg.rapkgektdWvmheyr 127
                       + +g ++g k++L f++g + +++ ktdW+mhe+ 
  Migut.N00806.1.p 107 NIDGVTIGSKRSLNFWEGlHPNRSIKTDWIMHEFI 141
                       *****************96677788********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.1E-4311171IPR003441NAC domain
PROSITE profilePS5100544.33514172IPR003441NAC domain
PfamPF023657.5E-2015140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MENNHQDYES AYQYPPGYRF APKDEELITE YLVKKINNQP IPIDDIRVVD FYKYNPDTYS  60
GKYPTLGDNE WYFFTLRNKK NPKGSRPDRT ANNGYWRATT ADTPIKNIDG VTIGSKRSLN  120
FWEGLHPNRS IKTDWIMHEF IAATNNQQPS RNKRDRNDTK FDDWALCRIH KRATKLDKKA  180
VAAHGRQFDQ EVQQLVAPAP VNLLPNFDIR VQSENLLVPA PAPAPENLLS DFDIRVQSEN  240
LLAPAPAPTP ANLLPDFNIR VHSENLLADF DINVPEYLLP APAPAPAPEG ELPSDFALYW  300
SSILEGLPIE EGKEEKEPAR EAADLPSEDS AKEFANDDAF WSSVFDDEDE EAQANQWARL  360
PKRRHL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-3761787174Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1358363RLPKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00806.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839499.10.0PREDICTED: NAC domain-containing protein 2-like
TrEMBLA0A022RYX41e-171A0A022RYX4_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N00806.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14648210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-42NAC domain containing protein 25