PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M02021.1.p
Common NameMIMGU_mgv1a024583mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 463aa    MW: 52655 Da    PI: 5.7974
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M02021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-09401453347
                       SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGgg.....tWktIartmg...kgRtlkqcksrwqky 47 
                        WT  E++ +  av+ lG +     +W++Ia +     + Rt+++++ +w++ 
  Migut.M02021.1.p 401 LWTSAEEKAFETAVENLGVEkpgsiHWRAIATEYSdtiQDRTAEDLRYKWRNM 453
                       5**************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-8394460IPR009057Homeodomain-like
PROSITE profilePS512949.081394458IPR017930Myb domain
SuperFamilySSF466894.64E-9396455IPR009057Homeodomain-like
SMARTSM007179.2E-7398456IPR001005SANT/Myb domain
PfamPF002491.8E-7401453IPR001005SANT/Myb domain
CDDcd116608.09E-7402455No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MYNVSSMDID ADIAHWMLDY LLRQPLEEWK LSALIDALPL SNTDTNTRLE RLILLKQLEY  60
KAARFPVSRS TLVLFEQLEE LDSRQGNMKV SDGMKHAYCA VAVNWTMEGA ICQIEFFHAV  120
TGLMERIEMM EKHVERNGAL CSEELSEWIK DIKASMWNAH LFKSIMKKVE GLDVLDAVRV  180
FVKGEREKMG PPLLELVKKL KDDEYVMEFL RGKAKIVDPD SGDENAMGPS YETSCKSPMS  240
EEVRIVRRAL HKSLLDLEAV VKDPLPEALK YSAEVMAKFM ARTGGRNMAQ EENMNQDTVK  300
ENAESMAGTS AREMPGKENH LELNQIDVVG DGNVQATTGI DKGNVRRPSL MERNKSARTS  360
EWTEYEPEEE QGSRLPSPRT TKNAPNKPGK ENGKDRRIRR LWTSAEEKAF ETAVENLGVE  420
KPGSIHWRAI ATEYSDTIQD RTAEDLRYKW RNMTKAKAKR YG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M02021.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829686.10.0PREDICTED: uncharacterized protein LOC105950864
TrEMBLA0A022RXD50.0A0A022RXD5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439