PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01765.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRF
Protein Properties Length: 390aa    MW: 42930.8 Da    PI: 9.0866
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01765.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC82.34.3e-26159202144
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                       d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e
  Migut.L01765.1.p 159 DPEPGRCRRTDGKKWRCSRDVVAGHKYCERHMHRGRNRSRKPVE 202
                       79***************************************987 PP
2QLQ44.54.8e-1689124136
               QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 
                       s+F+ +Q+q+L+ Q+l++++++a++ vPpeLl  ++
  Migut.L01765.1.p  89 SHFSLTQWQELELQALIFRHMIAGATVPPELLHLVK 124
                       79*****************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009514.0E-989125IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166618.24790125IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.5E-1190123IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.762159203IPR014977WRC domain
PfamPF088795.0E-22160202IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MDFNFKQWRN HSEQQDDQED LLHTSSKLPK LLLNSHPHHH HQPPPPASSS SSSALPLFVV  60
TEPNTNLSAS YSSDHNSTTT TKFPRMGSSH FSLTQWQELE LQALIFRHMI AGATVPPELL  120
HLVKKSIIVN YPPSSYHHYY PHYQPALLQS GYWGKSAMDP EPGRCRRTDG KKWRCSRDVV  180
AGHKYCERHM HRGRNRSRKP VEIPTPKSNQ GAVSATSTGT GGGFPRFTLS APSDLLHLNQ  240
SDICRPTNSI IETKVHLQQS QTNNKTLRHF FDDWPPKPLG HEDDNSMMTS SSSTKLSISM  300
PENPSSDFSL KLGTGGDGGE AAGGNRVIVD ENSSSSSRLN WGMMTWQNNP AAPMGGPLAE  360
ALRSSVSNSS PTSVLHRLPP GGASQSSYV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01765.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836103.10.0PREDICTED: growth-regulating factor 3 isoform X1
TrEMBLA0A022RI871e-172A0A022RI87_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32832138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.14e-51growth-regulating factor 4