PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L01760.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Trihelix | ||||||||
Protein Properties | Length: 591aa MW: 67409.3 Da PI: 8.5317 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 93.7 | 1.9e-29 | 153 | 238 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+e+r++++++++++++k+plW+e+++ m +e+g++rs k+C+ek+enl k+ykk+keg++++ ++ +++++f+qlea Migut.L01760.1.p 153 RWPRQETLALLEIRSNLDSKFKEANQKGPLWDEIARIMcEEHGYQRSGKKCREKFENLYKYYKKTKEGKSGK--RQGKHYRFFRQLEA 238 8***********************************998*******************************96..55567*******85 PP | |||||||
2 | trihelix | 47.5 | 4.6e-15 | 444 | 521 | 2 | 73 |
trihelix 2 WtkqevlaLiearremeerlrr.....gklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrts 73 W+++e+ Li++r+eme+r+++ +++++ lWee+++km g ++s+ +C+ekw+++n + k+++ + +r++ Migut.L01760.1.p 444 WPESEITRLIQLRNEMESRFQQcringSNSDGMLWEEIAAKMGCFGNeQKSASMCREKWDSVNDYLIKCNKKKLRREN 521 *********************75565568*************99999567***************9888776554422 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.31 | 150 | 213 | IPR001005 | SANT/Myb domain |
Pfam | PF13837 | 3.5E-20 | 153 | 239 | No hit | No description |
PROSITE profile | PS50090 | 7.027 | 153 | 211 | IPR017877 | Myb-like domain |
CDD | cd12203 | 2.44E-22 | 153 | 218 | No hit | No description |
SMART | SM00717 | 0.91 | 440 | 508 | IPR001005 | SANT/Myb domain |
Pfam | PF13837 | 5.9E-10 | 444 | 535 | No hit | No description |
CDD | cd12203 | 4.26E-15 | 444 | 508 | No hit | No description |
PROSITE profile | PS50090 | 6.539 | 444 | 506 | IPR017877 | Myb-like domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 591 aa Download sequence Send to blast |
MIRVYRSPIH RYLLLFSLSK FSLIQLNLIK TFTVCVFDRF DSISLSLIIY NMEDQYGMAD 60 LRQYITGGRP YFPAVSRQPD FLQSSHHHHR GLISPHPYDM LMFGSDHPNI VLNASAGGGE 120 PSSAAAARGL SVSFEMDAAG GAIGGGDGGC TARWPRQETL ALLEIRSNLD SKFKEANQKG 180 PLWDEIARIM CEEHGYQRSG KKCREKFENL YKYYKKTKEG KSGKRQGKHY RFFRQLEALY 240 GDQTASNNNN YNNNNNNNNN NNYSASVISG TNYDRCNYPL ANNSNYQEAS CLVPKLSAET 300 SHVSFSNCSS DSNTSSSDDE SDTNNPRKNK KMKKRGGKRD LKAKIKESIE AQMKKLMEKQ 360 EAWMEKMMNT IEHKDQERIM REEQWRKQDS DRIEREHKFW AGERAWMEAR DAALMDAFNK 420 FTRKEFTRAD NSPSGNYNSN NIIWPESEIT RLIQLRNEME SRFQQCRING SNSDGMLWEE 480 IAAKMGCFGN EQKSASMCRE KWDSVNDYLI KCNKKKLRRE NINTTTKGGS SCMYYHDDTD 540 NQSIVCNQGL GGLLAYSSCD AISTEPQLSN STAVNDTCLR YFFGDGYGRS * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L01760.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836100.1 | 0.0 | PREDICTED: trihelix transcription factor PTL-like | ||||
TrEMBL | A0A022REI1 | 0.0 | A0A022REI1_ERYGU; Uncharacterized protein | ||||
STRING | Migut.L01760.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3063 | 24 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 7e-49 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.L01760.1.p |