PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00936.1.p
Common NameLOC105970860, MIMGU_mgv1a010559mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRF
Protein Properties Length: 310aa    MW: 34798.8 Da    PI: 9.2052
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00936.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.72.8e-2584128145
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                       d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+
  Migut.J00936.1.p  84 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVET 128
                       79****************************************985 PP
2QLQ56.86.9e-201549236
               QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                      +FT++Q+q+L++Q+l+yKy++ + P+Pp+Ll+ i+
  Migut.J00936.1.p 15 PFTPSQWQELEHQALVYKYMVYGIPIPPDLLFTIR 49
                      9******************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009516.3E-111450IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.5681550IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.2E-141549IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.44884128IPR014977WRC domain
PfamPF088792.7E-2185127IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MMSNNNIGRS SRFNPFTPSQ WQELEHQALV YKYMVYGIPI PPDLLFTIRR SLHHHHSSST  60
TFLLHHHHSG SWNSFNMGFG KKIDPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN  120
RSRKPVETVL LPHSSTAANS PCNRNAATTT TTTTPLGNTL LPSHHPPPHF LYSHFLSESN  180
PTLCRNTSDG RAAANGGGGA DEHVFFPDGG GGSSSSSSSQ TKVLQYGYSS NCDLFGGQRM  240
IQNASLDKRD ELHPHKKVMH HFIDECPPKD DNGQYSDDKT TIMPMPIHRT QLSISINPNS  300
LHDFFITHK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00936.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851137.10.0PREDICTED: growth-regulating factor 5
TrEMBLA0A022QE120.0A0A022QE12_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7432384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.12e-49growth-regulating factor 5