PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00452.1.p
Common NameMIMGU_mgv1a024147mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 282aa    MW: 30288 Da    PI: 7.5619
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00452.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.4e-05109131123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C+ C+ksFs+   L  H  +H
  Migut.J00452.1.p 109 YQCKTCDKSFSSFQALGGHRASH 131
                       9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.83E-10108131No hitNo description
PfamPF139122.5E-12108133IPR007087Zinc finger, C2H2
SMARTSM003550.022109131IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.367109136IPR007087Zinc finger, C2H2
PROSITE patternPS000280111131IPR007087Zinc finger, C2H2
SuperFamilySSF576678.83E-10180207No hitNo description
PfamPF139122.0E-12184209IPR007087Zinc finger, C2H2
SMARTSM003550.03185207IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.619185207IPR007087Zinc finger, C2H2
PROSITE patternPS000280187207IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MFLQADLEDQ VVMLKGKRTK RPRPPSSLEL TTMAPTTSSS STAAAAGGGV TSDEVSDRTT  60
PSLSDSGELT HDEEQDMANC LILLAKGQRQ RMPLPPPPPP PAAAAMDVYQ CKTCDKSFSS  120
FQALGGHRAS HKKPSSKPIT ITAVDEYYQR SIQISDNNNN NNNNSNIYLG NQTRPKSTAT  180
TRRVHECSLC GAEFASGQAL GGHMRRHRPI PAASISGSGH GDQHPEVKRQ RNMLLSLDLN  240
LPAAPEEEQP AAAVAAESKF PFAPKEQVIV FSATPLVDCH Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11923KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00452.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831734.10.0PREDICTED: zinc finger protein ZAT5-like
TrEMBLA0A022RNN60.0A0A022RNN6_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-39C2H2 family protein