PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.I00074.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 231aa MW: 25210.4 Da PI: 9.2016 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.9 | 2.3e-13 | 70 | 114 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G g+W+ I+r k+Rt+ q+ s+ qky Migut.I00074.1.p 70 PWTEEEHKLFLIGLEKIGRGDWRGISRNYVKTRTPTQVASHAQKY 114 8*******************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51293 | 13.107 | 66 | 119 | IPR017884 | SANT domain |
SuperFamily | SSF46689 | 7.33E-17 | 66 | 120 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.1E-8 | 67 | 117 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.2E-10 | 69 | 114 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.3E-16 | 69 | 117 | IPR006447 | Myb domain, plants |
CDD | cd00167 | 5.64E-9 | 70 | 115 | No hit | No description |
Pfam | PF00249 | 1.3E-10 | 70 | 114 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MSLCSETPSA AAGGGEIMLF GVRVRVDPMR KSVSMNNLSE YEPVVNCSNP NDVNNTTEAP 60 KVAAEDGGVP WTEEEHKLFL IGLEKIGRGD WRGISRNYVK TRTPTQVASH AQKYFLRRNN 120 LNRRRRRSSL FDITTDSVTA MATEESKNHQ DNTPVQMVPR PPPTVAMPLP VTSNVNGFSL 180 GPVLFSNQHV KNEASSLSLR LSLSSGQDQP SRMGSPFHML NSGDSVLSVA * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.I00074.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831100.1 | 1e-139 | PREDICTED: transcription factor MYB1R1 | ||||
Swissprot | Q2V9B0 | 3e-52 | MY1R1_SOLTU; Transcription factor MYB1R1 | ||||
TrEMBL | A0A022RRY8 | 1e-134 | A0A022RRY8_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2574 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74840.2 | 6e-47 | MYB_related family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.I00074.1.p |
Publications ? help Back to Top | |||
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