PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H01546.1.p

Common Name

LOC105962252, MIMGU_mgv1a007745mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

GeBP

Protein Properties

Length: 391aa MW: 42980.4 Da PI: 5.1955

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H01546.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.4	4.4e-33	169	264	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 lf+rlw+e+Dei+lL+Gl d+k+k++++p++++d f+ f+ ++++++v+k ql +KirrLKkK++++++k + +k++sfsk+h++ki+els+ Migut.H01546.1.p 169 LFHRLWNEDDEIALLKGLADYKQKKKADPYAELDSFHLFIGENLHVEVTKAQLQDKIRRLKKKYETNKTKDQPNKDKSFSKPHEKKIYELSEP 261 799**************************************************************************************** PP DUF573 95 iWg 97 +Wg Migut.H01546.1.p 262 VWG 264 8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	4.5E-30	170	264	IPR007592	Protein of unknown function DUF573

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005730	Cellular Component	nucleolus

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence Send to blast
MAKIPEAEKR AKSESDSDEE ESDGSSSEEG SSESGSESES EQKQPAVAKK PSSLPPAAAK 60 KTKSLVQKPS EKSESESESG SESDSDESEA EVEQVAPKPA ADPPKSKSVA KKPNPPKPAA 120 ASTVTPPTKS TAKKRAAEDK QSAAKGSKKP KADPENSEAN SKDETKKQLF HRLWNEDDEI 180 ALLKGLADYK QKKKADPYAE LDSFHLFIGE NLHVEVTKAQ LQDKIRRLKK KYETNKTKDQ 240 PNKDKSFSKP HEKKIYELSE PVWGNVEKAV EKSASVKKTR GKSVNVVENG ESDDAKNEEN 300 VVENGESDDV ENEKSVDVVS GDVEKGAATT GSDYSSVQNR ISRMGAEMYE GADDGTELQK 360 RWRKLREKEM EIHMMKLELM RDQTKLVLDV *

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence Send to blast

MAKIPEAEKR AKSESDSDEE ESDGSSSEEG SSESGSESES EQKQPAVAKK PSSLPPAAAK  60
KTKSLVQKPS EKSESESESG SESDSDESEA EVEQVAPKPA ADPPKSKSVA KKPNPPKPAA  120
ASTVTPPTKS TAKKRAAEDK QSAAKGSKKP KADPENSEAN SKDETKKQLF HRLWNEDDEI  180
ALLKGLADYK QKKKADPYAE LDSFHLFIGE NLHVEVTKAQ LQDKIRRLKK KYETNKTKDQ  240
PNKDKSFSKP HEKKIYELSE PVWGNVEKAV EKSASVKKTR GKSVNVVENG ESDDAKNEEN  300
VVENGESDDV ENEKSVDVVS GDVEKGAATT GSDYSSVQNR ISRMGAEMYE GADDGTELQK  360
RWRKLREKEM EIHMMKLELM RDQTKLVLDV *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H01546.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012842004.1	0.0	PREDICTED: mediator-associated protein 1-like
TrEMBL	A0A022R526	0.0	A0A022R526_ERYGU; Uncharacterized protein
STRING	Migut.H01546.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3042	19	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	3e-24	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Migut.H01546.1.p
Entrez Gene	105962252