PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01532.1.p
Common NameMIMGU_mgv1a005248mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 494aa    MW: 53985.9 Da    PI: 6.6021
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01532.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.4e-31257312156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Migut.H01532.1.p 257 KARRCWSPDLHRRFVNALHMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 312
                       68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.453254314IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-28255315IPR009057Homeodomain-like
SuperFamilySSF466899.32E-17255315IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-26257312IPR006447Myb domain, plants
PfamPF002494.0E-7259310IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009266Biological Processresponse to temperature stimulus
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010452Biological Processhistone H3-K36 methylation
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:1903507Biological Processnegative regulation of nucleic acid-templated transcription
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MMTSPSELSF DCKPQIYSML PKPFGEQILS CDQQTQKIEE FLARLEEERL KIDAFKRELP  60
LCMQLLTNAM EASRQQLQSQ RTNQEERPIL EQFIPLKNTS NNSCNNNISD KEANLSADKA  120
NWMTSAQLWN QESGEEEEEE EETKPPPSPL RTILPPQEIT DFKLGFTNEG KKVINGGGGA  180
FLPFSSSSSM NCGEGFPELA LANSSRNEEM KNSSSSSEVV KNICRRENSV AVVGSEREQV  240
VVSGGAAASN GSQTNRKARR CWSPDLHRRF VNALHMLGGS QVATPKQIRE LMKVDGLTND  300
EVKSHLQKYR LHTRRPSPSP QTSVAAGPQV VVLGGIWVPP EYAAAAAAHH HSGAQAAALY  360
GAHAAHHLSP SFCGSQSAQP GQQELYPAIA PPPPPHNHQL HRHAIHHHQQ QQQQQQQLHL  420
YNKPPPLTQR GRNISPETDV RGGGGAGDPS ESIEDGKSES GSWKADSGGG ENGGERRRLD  480
GEESNGSGVT LKF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A8e-14257310154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-14257310154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-14257310154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-14257310154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00261DAPTransfer from AT2G03500Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01532.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842020.10.0PREDICTED: uncharacterized protein LOC105962262 isoform X2
SwissprotQ9ZQ851e-105EFM_ARATH; Myb family transcription factor EFM
TrEMBLA0A022QZR10.0A0A022QZR1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87942229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.16e-92G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]