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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.F00310.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
GRAS |
Protein Properties |
Length: 554aa MW: 60693.1 Da PI: 7.3265 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.F00310.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 89.9 | 4.2e-28 | 267 | 388 | 2 | 126 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+++L++ A a+s+ + e+a ++L+rl++ + +g+p qRl++y++ AL++r+ ++ +p + + +e++a+++++++vsP++k++
Migut.F00310.1.p 267 KQALIDTAAAISEAKPEAAVEILTRLQQSGNARGTPEQRLTSYMVSALKSRVGP-----AENQQPISPEIIYGKEHTASTQMLYDVSPCFKLG 354
589**************************************************9.....333333333334499******************* PP
GRAS 95 hltaNqaIleavege..ervHiiDfdisqGlQWp 126
+++aN aIlea+ ++ +++H++Dfdi+qG+Q++
Migut.F00310.1.p 355 FMAANLAILEATWEQgfDKIHVLDFDIGQGGQYL 388
***********987777***************96 PP
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2 | GRAS | 164.3 | 1e-50 | 388 | 553 | 210 | 374 |
GRAS 210 lhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
l++l+desv++e+ rde+L+ vkslsP+v++vveqe+++n++++ +r+ +a eyy alfdsl+a+++re+ +r+ +E+ l+r+i+n va eg
Migut.F00310.1.p 388 LYKLPDESVTTENLRDELLRRVKSLSPEVMTVVEQEMNTNTAPLTARVRDAYEYYGALFDSLDATVSRENPDRVRIEEG-LSRKISNSVAGEG 479
6899***************************************************************************.************* PP
GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
++r+er+e l+kWr+r+++aGF+p ++s+ a+++ ++ l+ + g++v+eesg +++gW++r L+++SaWr
Migut.F00310.1.p 480 RDRVERCEVLGKWRARMSMAGFQPRKMSQLAVESLRSKLNSGTrgNPGFSVNEESGGICFGWMGRILTVASAWR 553
************************************999876556899*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 554 aa
Download sequence Send
to blast |
MSSGYSGGVP DFFSAGRRST AMSTNMNNNY NSSLNAQQQF AFRSPVSGIP PDPAAQIHRP 60 NFIGKRSLAE FQQQQSFLQQ QQNRQGLGFY LRNVKPRPKY HQHASPISPL SPVDFPPVPS 120 ISPEFSSSSS VSTSGNSRYG LPILQHHRLQ PMTLSHRSNI RNMSQHTGFA NTGMNISGPG 180 LGPGTEGSAH ESEKIMMSHR LQELEKQLLG DEDDAETVSV VTDSEWSETI QNLINPIIQK 240 PVSPSPTSSS SSCCSSTSAS PPLPCPKQAL IDTAAAISEA KPEAAVEILT RLQQSGNARG 300 TPEQRLTSYM VSALKSRVGP AENQQPISPE IIYGKEHTAS TQMLYDVSPC FKLGFMAANL 360 AILEATWEQG FDKIHVLDFD IGQGGQYLYK LPDESVTTEN LRDELLRRVK SLSPEVMTVV 420 EQEMNTNTAP LTARVRDAYE YYGALFDSLD ATVSRENPDR VRIEEGLSRK ISNSVAGEGR 480 DRVERCEVLG KWRARMSMAG FQPRKMSQLA VESLRSKLNS GTRGNPGFSV NEESGGICFG 540 WMGRILTVAS AWR*
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