PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00762.1.p | ||||||||
Common Name | MIMGU_mgv1a013373mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 24801.6 Da PI: 5.0569 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.1 | 8.3e-05 | 1 | 37 | 16 | 55 |
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +N+ + Lr+l+P++ + ++ + a+i+ A+e++k+L+ Migut.E00762.1.p 1 MNEHLPVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 37 7999999********...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.086 | 1 | 36 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.09E-7 | 1 | 54 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.7E-5 | 1 | 50 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.69E-5 | 1 | 41 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MNEHLPVLRS LMPESYVQRG DQASIVGGAI EFVKELEHIL QSLEAKKFTL LEQQGNNNTN 60 NNNNINNNNN SNNNNNNNNE DNYNPDQEIS DDNSSIKQVS PFAQFFAYPQ FSCSNNQMGN 120 KYTSQSKAAI ADIEVTLIET HANIRILSRR RLRQLSKIVA SFHSVSLTIL HLNVTTLDLL 180 VLYSISAKVE EGCQLSSADE IAGAVHHMLR IIEEEAILGC QS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00762.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP257527 | 8e-40 | KP257527.1 Salvia miltiorrhiza clone 94 basic helix-loop-helix transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012840855.1 | 1e-161 | PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH71-like | ||||
TrEMBL | A0A022R1Q2 | 1e-160 | A0A022R1Q2_ERYGU; Uncharacterized protein | ||||
STRING | Migut.E00762.1.p | 1e-161 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5632 | 24 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 5e-49 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00762.1.p |