PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00077.1.p
Common NameLOC105974788, MIMGU_mgv1a017119mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 93aa    MW: 10689.3 Da    PI: 10.0196
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00077.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.29.1e-191663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEd++l+ +v+++G g+W++ +++ g+ R++k+c++rw +yl
  Migut.E00077.1.p 16 KGPWTLEEDQKLLAYVEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 63
                      79********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-251066IPR009057Homeodomain-like
PROSITE profilePS5129424.0981167IPR017930Myb domain
SMARTSM007179.6E-141565IPR001005SANT/Myb domain
PfamPF002492.0E-171663IPR001005SANT/Myb domain
SuperFamilySSF466892.79E-241791IPR009057Homeodomain-like
CDDcd001677.99E-111863No hitNo description
PROSITE profilePS500903.9846492IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.5E-86791IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MGRTINGGYE KVELKKGPWT LEEDQKLLAY VEEHGHGSWR ALPAKAGLQR CGKSCRLRWT  60
NYLRPDIKRG KFTSQEEKDI MRLHALLGNR YC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A6e-181392482B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00077.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2022671e-127HQ202267.1 Mimulus guttatus pop-variant IM62 MYB transcription factor MIXTA-like 2 protein (MYBML2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855396.12e-63PREDICTED: myb-related protein Myb4-like
SwissprotQ9LE633e-45MY106_ARATH; Transcription factor MYB106
TrEMBLA0A022Q1H04e-62A0A022Q1H0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.13e-47myb domain protein 106