PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02294.1.p
Common NameMIMGU_mgv1a021331mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 270aa    MW: 28662 Da    PI: 8.0758
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02294.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00089114136123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C+ C+++F++   L  H  +H
  Migut.D02294.1.p 114 YECKTCSRTFPSFQALGGHRASH 136
                       99**********99999998887 PP
2zf-C2H212.10.00058180202123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++Cg  F +   L  H+r+H
  Migut.D02294.1.p 180 HECSICGSEFASGQALGGHMRRH 202
                       78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.6E-13113138IPR007087Zinc finger, C2H2
SuperFamilySSF576675.66E-8113136No hitNo description
SMARTSM003550.11114136IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.78114141IPR007087Zinc finger, C2H2
PROSITE patternPS000280116136IPR007087Zinc finger, C2H2
SuperFamilySSF576675.66E-8175202No hitNo description
PfamPF139121.9E-11179204IPR007087Zinc finger, C2H2
SMARTSM003550.031180202IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.93180207IPR007087Zinc finger, C2H2
PROSITE patternPS000280182202IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MNMEISEDFS GCTNVHQIIV KGKRAKRPRP SSSASSAAAA GEFINNSNSL VSSPATSSSV  60
ISTSTEEDED MANCLILLAQ GGGGGGTEGK FSSRRFPEMT AATAAEGKVG VYVYECKTCS  120
RTFPSFQALG GHRASHKKPK PSAAAADVDR KRPPPPAAAP IDQTAEYAPA APSTQFPKTH  180
ECSICGSEFA SGQALGGHMR RHRSAATNTN TTSSDIIDAG EKTRNMLELD LNLPAPPEDD  240
RREMKFHRFT PNKQPRLVFS TAALVDCHY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12529KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02294.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837962.11e-148PREDICTED: zinc finger protein ZAT5-like
TrEMBLA0A022RBE30.0A0A022RBE3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-36C2H2 family protein