PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D01891.1.p

Common Name

LOC105972610, MIMGU_mgv1a010766mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 303aa MW: 32853.1 Da PI: 8.4852

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D01891.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.1	4.6e-14	104	148	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G+g+W+ I+r k+Rt+ q+ s+ qky Migut.D01891.1.p 104 PWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 148 8*******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	16.592	97	153	IPR017930	Myb domain
SuperFamily	SSF46689	5.31E-17	99	154	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.1E-17	100	151	IPR006447	Myb domain, plants
SMART	SM00717	3.8E-10	101	151	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	9.3E-11	103	148	IPR009057	Homeodomain-like
Pfam	PF00249	2.2E-11	104	148	IPR001005	SANT/Myb domain
CDD	cd00167	1.11E-9	104	149	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
MSFCGESPSD AVSGGGNGSI DGGDCGEGEI MLFGVRVQVD PMRKSVSMNN LSEYEPVSNT 60 CNLSEKSGDE LPKAADDGGV VVGYASADDA RRRPANVERK RGVPWTEEEH KLFLLGLQKV 120 GKGDWRGISR NYVKTRTPTQ VASHAQKYFL RRSNINRRRR RTSLFDITTD SVNAVPMEES 180 RNHHQSGPSQ PLPQPTTSMP PPPPPPVTSG LRGYSIMHFP VIVTPVLVPM QGENPMTNTA 240 FGRNIPMNNS SSMFVHQVPV LHMPPSSTMI DLNLNQQLPS ETSPLSLRLS LSSSGQVISS 300 VS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	161	RRRRRT

Functional Description ? help Back to Top
Source	Description
UniProt	Binds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269\|PubMed:21030505}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00631	PBM	Transfer from PK23829.1	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D01891.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269\|PubMed:21030505}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012853030.1	0.0	PREDICTED: transcription factor MYB1R1-like
Swissprot	Q2V9B0	2e-67	MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBL	A0A022QA48	0.0	A0A022QA48_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2574	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74840.2	1e-52	MYB_related family protein

Link Out ? help Back to Top
Phytozome	Migut.D01891.1.p
Entrez Gene	105972610

Publications ? help Back to Top
Shin D, et al. Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance. Plant Physiol., 2011. 155(1): p. 421-32 [PMID:21030505]