PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01033.1.p | ||||||||
Common Name | LOC105972404, MIMGU_mgv1a026942mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Trihelix | ||||||||
Protein Properties | Length: 377aa MW: 42607.3 Da PI: 4.3658 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43 | 1.2e-13 | 141 | 220 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++ e+ + +r++l+ W+evs+k+ +e ++er+ +qC+++++ l+k+ykk+k ++ s+++yf++++ Migut.D01033.1.p 141 WTEHETFTLLDSWGERYLKQGRKSLRSEEWQEVSEKVsQESKLERTDTQCRNRLDTLKKKYKKEKSKPNS------SEWVYFKKID 220 *************************************88999**********************998886......68*****997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.0E-20 | 140 | 222 | No hit | No description |
PROSITE profile | PS50090 | 6.156 | 141 | 198 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 6.8E-4 | 141 | 205 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence Send to blast |
MMNDDEDDAS YHANTYSVNS QKFPIENPDY DDDDDSDDDD VDDDDKGIVV IEQDDDDEDD 60 DDEGNGIQRI GKDDYECGDV DEDENEGVNS TDLHKHPKKR KLKTLLPSYE FAPRAPPVPP 120 PPPAPKPPAS YGGGRNPLTD WTEHETFTLL DSWGERYLKQ GRKSLRSEEW QEVSEKVSQE 180 SKLERTDTQC RNRLDTLKKK YKKEKSKPNS SEWVYFKKID SLLSTPPPPN QTALSCGVDS 240 GEYVFTNPRA YLNRSNGFDE MRDSPGNSGS AEGGGNESEG LPPKRARNGR VKNSGGGGSF 300 KILADSFQKF SKIYEKIEDS KRKQMVELEK MRMDFHRDLE MQKRQILERA QAEIAKIWQG 360 DDDDEENTVS AENVSG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 100 | KHPKKRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01033.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852810.1 | 0.0 | PREDICTED: trihelix transcription factor ASIL2-like | ||||
TrEMBL | A0A022Q7K9 | 0.0 | A0A022Q7K9_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D01033.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7230 | 24 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 1e-63 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01033.1.p |
Entrez Gene | 105972404 |