PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00823.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 452aa    MW: 48845.2 Da    PI: 9.7926
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00823.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.9e-05209231223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                        C+ Cg++F+  ++L++H  + H
  Migut.C00823.1.p 209 ACSECGEVFPKLESLEHHRAVkH 231
                       6*****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.912208236IPR007087Zinc finger, C2H2
PROSITE patternPS000280208231IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.106.0E-10233447IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563994.17E-20233280No hitNo description
SuperFamilySSF563994.17E-20307447No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MKERSRNSMP QVLFHYFLTL ILMALLTFLP ESSSSSHHDA KKNVRTSNNT SNRKKKKEIT  60
KQPSSWDQIK NLLTCKQIED SKIHDPSRRS RSSSSNNNTN IYTSCSSICT FRDVVHGNAR  120
VVHRADNSPE SSALGGQETR LLTKKTAASH GSSSSSRSIN STSARTAAAG GAPYTCGRGM  180
QFRKLSGCYE CHSIVDPSRY PLPRTTICAC SECGEVFPKL ESLEHHRAVK HAVSELGPED  240
SSRNIVEIIF KSSWLKKDNP ICKIERILKV HNTQRTIQRF EDYRDSVKIR ANTTTTNSAA  300
ARRSTNARCA ADGNELLRFH CAALTCSLGA RGSSSLCGSV PACGVCTIIR HGFQGSRTSG  360
IRTTASSGRA HDGLAGLGAR RAMLVCRVIA GKVKGAAAGD AAAAADEIGA GGSYDSVAGY  420
AGVYSDLEEL HVFSSRAILP CFVVIYKALE Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15257RKKKKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00823.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825720.0AC182572.2 Erythranthe guttata clone MGBa-75A14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835734.10.0PREDICTED: uncharacterized protein LOC105956430
TrEMBLA0A022RGA80.0A0A022RGA8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-136C2H2-like zinc finger protein