PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00545.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 404aa    MW: 45973.8 Da    PI: 6.646
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00545.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-05151174123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       y+C+ Cg+ ++++++Lk+H +  H
  Migut.C00545.1.p 151 YVCSVCGRKCKTNMDLKKHFKQlH 174
                       9******************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10104.8E-773141IPR029060PIN domain-like
SMARTSM003550.0066151174IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.177151179IPR007087Zinc finger, C2H2
PROSITE patternPS000280153174IPR007087Zinc finger, C2H2
CDDcd061673.18E-13163305No hitNo description
PfamPF019361.3E-5223291IPR021139NYN domain, limkain-b1-type
Gene3DG3DSA:3.40.50.10104.8E-7236290IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MAILINSIAQ FPLKPQFTFK THSQNPPFNF NPPTAPATIK PHQWRRRAIK SCIPSPDIDM  60
VRTKAGVYAA KAKKVVVLWD LDNKPPRGPP YEAAIALKTL AQRFGDVVDM AAYANRHAFI  120
HLPQWVVEER RQSRSLDFRE RKGLSAPPEP YVCSVCGRKC KTNMDLKKHF KQLHERERQK  180
KLSRMRSLKG KKRQRFKERF IEGNEKYNEA ARNLLTPKTG YGLAQELRRA GVYVKTVQDK  240
PQAADWALKK QMLHSMNRGV DWIVLVSDDS DFSETLRKAR EANLGTVVVG DRGRALGRNA  300
DVWVPWIGVE NGEIKESDLE LKSKEWREDS DERSGFSVSE FDGGLVGDLS LDEFIGSEEF  360
GGLRISSFDE GEDEYEYDDE DSDVDDEEQG DYSIDSDDEG ILF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00545.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851731.10.0PREDICTED: uncharacterized protein LOC105971424
TrEMBLA0A022QG440.0A0A022QG44_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-149C2H2-like zinc finger protein