PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.C00133.1.p

Common Name

LOC105966652, MIMGU_mgv1a000338mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 1238aa MW: 135754 Da PI: 4.8127

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.C00133.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	432	454	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C++C+ +Fs k++L +H+++ H Migut.C00133.1.p 432 YCNKCNITFSEKDQLLQHQSSvH 454 6******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF54171	1.34E-5	301	352	IPR016177	DNA-binding domain
PROSITE profile	PS50157	10.055	431	459	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.039	431	454	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	433	454	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.59	476	498	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.349	476	503	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	478	498	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1238 aa Download sequence Send to blast
MVSVTATTTT ADGGGGGGLK LDSIPIVDLR LLSQSELYSL SLCSSSAFDP CRRDDVVIPN 60 IDRSVFNESA GSRKQTYSRL RLAPPSSSSS AAPRRRTPHL RSSAASLANA IDNNNSDPEN 120 VENAQIVTLL KQLFVTDVNY EELVPVKIDY SNSLPPQLVP VRIDYSNSLP HRQFSPFPSS 180 NVGPTGQKRK RGRPRKNQLL GRDEDSATRA NVVNVDEANG FSSLNEIVVH ENAEERDREV 240 VNKDGVAVDL VALGMVEHPY GEEIRRRTQG MLTEDELLGF LKGLNGSWGS RRKKKRIVDA 300 NEFGSVLPVG WKLLLSIRKQ HGQAWLYCRR YISPSGLYFV SCKGVSSYMC SLYGIQDTNT 360 DSLAQSNGTV NDADNLTSVM IADPAVQGDE RKENMVPRAS SPTSGSISGN HEVQAVINAG 420 DLPQDRRGEN LYCNKCNITF SEKDQLLQHQ SSVHRKNRCK SGMRITDGVI IKDGKYECQF 480 CHKTFDERHR YNGHVGAHVR YQAKTAGESP LQSGDPVSFD QFPIRDTTIE GSLMSNNNVQ 540 ICNTITSNKD IEHVGDVKEA NVGVATDMVT NENPCSVAEV LCSNDEAKSF HEDARVKGSA 600 VEITDDGSSL PLDASLHGVM NGTAFENSTC TEKPEQREVF NRSLFDSDGP VEECEVVVNN 660 QPICQTSNDI KLDYKNFAVN GSALDFSGRY GEQDGDLSRS IKQQSNFESM PSKNIGTSDS 720 TSTFKSMASE LTKDPKTIML PVAHEEKECL VDNLTCSIGE RIETCENGSS IACDDGVSRQ 780 VQFGMSSAIP TWDRLENMSG KDDAEALTCV LKQPGVNTSE RRSADLSGNQ IMYGYEKNSE 840 EVCGRKMEAH AFDDFRNLGN VESSDPFRSN HAVLNSNSVG GNEQRRELGD CPDFTSATDK 900 RFFTEDNMIS IFNDAFGQNK QDPSGVSEGC HEAYTSSKIY GTPANPSGLG EIEDIGKYGL 960 SLSFDNRQTE FCTDSNRVDQ ERYQADSVNT QSALRKTYGD QTHLNITNSS TPGDLKQGRS 1020 FGIDFPDSSF NITTSELGSG FNQVRDWSGQ TRGKMAATSG QNFMIGFQNN SSQSGECVTA 1080 GGSWRTGQEN LFQGCFDAPV GQQQVPASSC FHNFDITSDK GEEESPFSLN KKYDFHTDML 1140 RPGRPEPVEY SFMGEQSSNT LSGESKIFSS FSENMDQGLD HSFWLGKDDL MPNASQTTSV 1200 CVWCRNIFFQ DTVQSGIQTG AIGTMCPSCS TRIPGQF*

Sequence ? help Back to Top

Protein Sequence Length: 1238 aa Download sequence Send to blast

MVSVTATTTT ADGGGGGGLK LDSIPIVDLR LLSQSELYSL SLCSSSAFDP CRRDDVVIPN  60
IDRSVFNESA GSRKQTYSRL RLAPPSSSSS AAPRRRTPHL RSSAASLANA IDNNNSDPEN  120
VENAQIVTLL KQLFVTDVNY EELVPVKIDY SNSLPPQLVP VRIDYSNSLP HRQFSPFPSS  180
NVGPTGQKRK RGRPRKNQLL GRDEDSATRA NVVNVDEANG FSSLNEIVVH ENAEERDREV  240
VNKDGVAVDL VALGMVEHPY GEEIRRRTQG MLTEDELLGF LKGLNGSWGS RRKKKRIVDA  300
NEFGSVLPVG WKLLLSIRKQ HGQAWLYCRR YISPSGLYFV SCKGVSSYMC SLYGIQDTNT  360
DSLAQSNGTV NDADNLTSVM IADPAVQGDE RKENMVPRAS SPTSGSISGN HEVQAVINAG  420
DLPQDRRGEN LYCNKCNITF SEKDQLLQHQ SSVHRKNRCK SGMRITDGVI IKDGKYECQF  480
CHKTFDERHR YNGHVGAHVR YQAKTAGESP LQSGDPVSFD QFPIRDTTIE GSLMSNNNVQ  540
ICNTITSNKD IEHVGDVKEA NVGVATDMVT NENPCSVAEV LCSNDEAKSF HEDARVKGSA  600
VEITDDGSSL PLDASLHGVM NGTAFENSTC TEKPEQREVF NRSLFDSDGP VEECEVVVNN  660
QPICQTSNDI KLDYKNFAVN GSALDFSGRY GEQDGDLSRS IKQQSNFESM PSKNIGTSDS  720
TSTFKSMASE LTKDPKTIML PVAHEEKECL VDNLTCSIGE RIETCENGSS IACDDGVSRQ  780
VQFGMSSAIP TWDRLENMSG KDDAEALTCV LKQPGVNTSE RRSADLSGNQ IMYGYEKNSE  840
EVCGRKMEAH AFDDFRNLGN VESSDPFRSN HAVLNSNSVG GNEQRRELGD CPDFTSATDK  900
RFFTEDNMIS IFNDAFGQNK QDPSGVSEGC HEAYTSSKIY GTPANPSGLG EIEDIGKYGL  960
SLSFDNRQTE FCTDSNRVDQ ERYQADSVNT QSALRKTYGD QTHLNITNSS TPGDLKQGRS  1020
FGIDFPDSSF NITTSELGSG FNQVRDWSGQ TRGKMAATSG QNFMIGFQNN SSQSGECVTA  1080
GGSWRTGQEN LFQGCFDAPV GQQQVPASSC FHNFDITSDK GEEESPFSLN KKYDFHTDML  1140
RPGRPEPVEY SFMGEQSSNT LSGESKIFSS FSENMDQGLD HSFWLGKDDL MPNASQTTSV  1200
CVWCRNIFFQ DTVQSGIQTG AIGTMCPSCS TRIPGQF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	290	295	RRKKKR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.C00133.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846699.1	0.0	PREDICTED: uncharacterized protein LOC105966652
TrEMBL	A0A022QLN2	0.0	A0A022QLN2_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7850	16	19

Link Out ? help Back to Top
Phytozome	Migut.C00133.1.p
Entrez Gene	105966652