PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00708.1.p
Common NameMIMGU_mgv1a025362mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 258aa    MW: 28315.5 Da    PI: 9.637
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00708.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.91.7e-202269249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      + en+sn qvtfskRr g++KKA+EL++L++ ++av++fs+ gk + +
  Migut.B00708.1.p 22 KMENESNLQVTFSKRRVGLFKKASELCTLTGSKAAVVVFSPGGKAHSF 69
                      679*****************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.3E-301372IPR002100Transcription factor, MADS-box
PROSITE profilePS5006622.5951373IPR002100Transcription factor, MADS-box
SuperFamilySSF554555.1E-241486IPR002100Transcription factor, MADS-box
PRINTSPR004041.1E-151535IPR002100Transcription factor, MADS-box
PfamPF003191.5E-222269IPR002100Transcription factor, MADS-box
PRINTSPR004041.1E-153550IPR002100Transcription factor, MADS-box
PRINTSPR004041.1E-155071IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MNPTNNPQPK KHKGRRKVNM EKMENESNLQ VTFSKRRVGL FKKASELCTL TGSKAAVVVF  60
SPGGKAHSFG HPDVNTIADQ YLNPNSQSGN NNVQQSSIPI EGQEYLAQHG QFLTLNSRPA  120
GNHAAGQSNH VQQSSTLIKD QQYLALVESQ IRAEKARGEE MDRMRKASLD KLNYQQLEHL  180
RGAIMEFSKK LGIQVEKGVD SKRGCDVVRG TYTGQDFGAS SSSHGNVVPY ATVIPYDQGA  240
TSADAEEFND GYGRRNF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00708.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842355.10.0PREDICTED: agamous-like MADS-box protein AGL62
TrEMBLA0A022R0V10.0A0A022R0V1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1979623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-34AGAMOUS-like 62