PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00609.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | CAMTA | ||||||||
Protein Properties | Length: 995aa MW: 111665 Da PI: 6.4342 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 180 | 2.8e-56 | 20 | 136 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e ++rwl++ ei++iL n++k++++ +++++p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg++++l+cyYah+e+n++f Migut.B00609.1.p 20 SEaQHRWLRPAEIVEILRNYQKFHISPAAPNKPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDMLHCYYAHGEDNENF 112 4449***************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+ywlLe++l +iv++hylevk Migut.B00609.1.p 113 QRRSYWLLEQDLMHIVFAHYLEVK 136 *********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 80.378 | 15 | 141 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 2.0E-78 | 18 | 136 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 5.6E-49 | 21 | 135 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 1.2E-6 | 407 | 494 | IPR013783 | Immunoglobulin-like fold |
SuperFamily | SSF81296 | 5.37E-15 | 408 | 494 | IPR014756 | Immunoglobulin E-set |
Pfam | PF01833 | 7.4E-5 | 408 | 493 | IPR002909 | IPT domain |
CDD | cd00204 | 7.35E-14 | 606 | 699 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 2.4E-16 | 606 | 703 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 4.51E-16 | 607 | 701 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 18.271 | 607 | 701 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 2.2E-7 | 612 | 699 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 9.6E-5 | 640 | 669 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 10.659 | 640 | 672 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 2200 | 679 | 708 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 0.73 | 815 | 837 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.59 | 816 | 845 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 8.23E-8 | 818 | 866 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Pfam | PF00612 | 0.0013 | 818 | 836 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 3.8E-4 | 838 | 860 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 10.109 | 839 | 863 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 4.1E-5 | 841 | 860 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071275 | Biological Process | cellular response to aluminum ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 995 aa Download sequence Send to blast |
MAESGSSSLG FRLDIKQILS EAQHRWLRPA EIVEILRNYQ KFHISPAAPN KPVSGSVFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDMLH CYYAHGEDNE NFQRRSYWLL 120 EQDLMHIVFA HYLEVKGNKT NISSSRNSDT VVSNSENNSV LLSSSFHGTS PSSTLSSACE 180 DAESEDNHQA SSRFHSFPES PLTDGSHYAQ SNSYNPTSSP GQTAFKQESG CYLPVQANWQ 240 DSFEDFSLKL HIPTMNQNLI LNLPPDQGNT SFEEKSLHVN QENFVRPFYT LPGEQKEQSE 300 QKNLQMLLSE AETGHAMNQN MENLSSMGNE NYSLFLKKPS ISGLQKEENL KKADSFSRWI 360 AKELEDYDEL NLQSNNGISW SGYGMPAQLQ VDLDTLNPSI SQDQLFSIMD FSPNWAYTNM 420 KTKVLITGIF LKSEQELSKC RWSIMFGQVE VAAEVLADGI LCCHAPLQKP GLVPFYVTCS 480 NRLACSEIRE FEYRFEQDQS MGGIDERGST NVMHLYQRFE TKLSLETSGS DLNSSGNDFG 540 KQNIINKIFS FMEEENNQEI KLTPEKDTTE LMVIGELLLQ KQLKEKFYTW LFHKLSYDSE 600 SIADVKGGQG VLHLAAALGF NWVLQPIIVS GISIDFRDVN GWTALHWAAH YGREDTVAAL 660 VSLGASPGAL TDPSAEYPLG RTPADLASSS GHKGISGFLA ETTLTTHLST LGVDDPLVHG 720 GSGFSGSRAV QTVSERLAVP TTGEDVPDTL SLKDSLAAIC NATQAAARIH QIFRTQSFHR 780 KQLLEHGGDE SVTPNENAIS LVAGKNSRLG RASGGANAAA VRIQKKFRGW KKRKEFLLIR 840 QKVVKIQAHF RGHQVRKKYK TIIWSVGIME KVILRWRRKR SGLRGFRSDA VAKVESGQGT 900 LPQEDDYDFL KEGRKQTEER MQKALARVKS MAQYPEARAQ YRRLLTAAEG FRETKDASDA 960 EIQETSDDMF YPQDDLIDIE SLLDDDTFMS LAFQ* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00043 | PBM | Transfer from AT5G64220 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00609.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012828340.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 2 isoform X1 | ||||
Refseq | XP_012828341.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 2 isoform X1 | ||||
Swissprot | Q6NPP4 | 0.0 | CMTA2_ARATH; Calmodulin-binding transcription activator 2 | ||||
TrEMBL | A0A022PSL8 | 0.0 | A0A022PSL8_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00609.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2230 | 21 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00609.1.p |
Publications ? help Back to Top | |||
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