PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00308.1.p

Common Name

LOC105957584, MIMGU_mgv1a007808mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

G2-like

Protein Properties

Length: 395aa MW: 44045.5 Da PI: 7.6744

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00308.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.2	6e-31	273	328	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH++Fv+a+++LGGs+ AtPk+i+++m+v+gLt+++vkSHLQk+Rl+ Migut.B00308.1.p 273 KQRRCWSPELHRKFVNALQSLGGSQAATPKQIRDHMQVDGLTNDEVKSHLQKFRLH 328 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.1E-27	270	331	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.896	270	330	IPR017930	Myb domain
SuperFamily	SSF46689	1.16E-16	271	331	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.6E-25	273	328	IPR006447	Myb domain, plants
Pfam	PF00249	7.9E-7	275	325	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MASLFSSELT LDCRFSPNSC YKETIGGISA QVSRSEALSE KISELVDYVN SLQDEMNKIG 60 GFKRELPHCM RLLKEEIGKM KEEMAELEKC NAEPPVLEEF IPLKKICTDE KDDDKVEGNN 120 KEKDKDVSSK EKMNWMSSVQ LWNSDANNQN PDTDFNNNKL SLKPENKKKR KEEEVNRGVM 180 DDLSQSGKIR TVGRAFVPFK GCANFPVMTV GKEDKNVLTV PKLSLCTPEI KNSMDAITSI 240 SFIPKSSSSK LGSLSSTNIR SSLKSGQQQN SRKQRRCWSP ELHRKFVNAL QSLGGSQAAT 300 PKQIRDHMQV DGLTNDEVKS HLQKFRLHTR KATLKSGGMW MSQEQCGESS KQNNCQSGSP 360 EGPLQLGGSS VGYSSEYEDD DKSESHTHLS VRDS*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MASLFSSELT LDCRFSPNSC YKETIGGISA QVSRSEALSE KISELVDYVN SLQDEMNKIG  60
GFKRELPHCM RLLKEEIGKM KEEMAELEKC NAEPPVLEEF IPLKKICTDE KDDDKVEGNN  120
KEKDKDVSSK EKMNWMSSVQ LWNSDANNQN PDTDFNNNKL SLKPENKKKR KEEEVNRGVM  180
DDLSQSGKIR TVGRAFVPFK GCANFPVMTV GKEDKNVLTV PKLSLCTPEI KNSMDAITSI  240
SFIPKSSSSK LGSLSSTNIR SSLKSGQQQN SRKQRRCWSP ELHRKFVNAL QSLGGSQAAT  300
PKQIRDHMQV DGLTNDEVKS HLQKFRLHTR KATLKSGGMW MSQEQCGESS KQNNCQSGSP  360
EGPLQLGGSS VGYSSEYEDD DKSESHTHLS VRDS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	170	LKPENKKKRK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00308.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836975.1	0.0	PREDICTED: uncharacterized protein LOC105957584
TrEMBL	A0A022RCD5	0.0	A0A022RCD5_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4361	24	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	6e-42	G2-like family protein

Link Out ? help Back to Top
Phytozome	Migut.B00308.1.p
Entrez Gene	105957584