PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.A01206.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

GeBP

Protein Properties

Length: 269aa MW: 31417.9 Da PI: 9.8112

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.A01206.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	45.7	1.8e-14	83	169	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 l+s++ e++lL Gl f ++ +d+ af+ f+++++ +++k+q++eK+rr+K Kf + ++k g s++h+ +i+elskk+W+ Migut.A01206.1.p 83 DLFSKQEELILLAGLDHFWIRKR---IHDWVAFHIFMNGHLP-HFTKNQITEKLRRMKLKFGRIREK--GGFRHFASNTHEADIYELSKKLWD 169 69**************87777...67********97.79*****************9..99999999*************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	8.3E-13	84	169	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MVISDEKSIL TNVEPEENQM VISDEKNIPT NVEPEENQMG ISDEKCVATN VEPKDVAKEI 60 EMLETNGEGE SSKTNEKKKK IGDLFSKQEE LILLAGLDHF WIRKRIHDWV AFHIFMNGHL 120 PHFTKNQITE KLRRMKLKFG RIREKGGFRH FASNTHEADI YELSKKLWDH EVIITAQCYD 180 QINLHRKRRQ ETAIKQRITR TRDCKVGGGG SRSTRSRHLL FFNLRHHHKQ LLFRPTISSN 240 HNSSLLFLLC LSFRQKSRRP ADECRLYS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.A01206.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857143.1	1e-127	PREDICTED: uncharacterized protein LOC105976422
TrEMBL	A0A022PX79	1e-126	A0A022PX79_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.A01206.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13664	4	13

Link Out ? help Back to Top
Phytozome	Migut.A01206.1.p