PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.A01003.1.p | ||||||||
Common Name | MIMGU_mgv1a018128mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 249aa MW: 28216.5 Da PI: 6.2435 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 66.2 | 7.2e-21 | 24 | 114 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +f +++ eeDei +L Gl + + +g+ +++++ ++f+k+ + ++s++ql+eKirrL+ Kf+ ++++ ++++f+++h++ +f+lskk Migut.A01003.1.p 24 KFAKVFREEDEIGVLEGLYVYWKCNGV--NHEWKKYHDFIKDDLPHHFSSTQLSEKIRRLRLKFQSNSRN----NNIHFRNAHESLVFDLSKK 110 7999*****************999995..589***********************************999....99***************** PP DUF573 95 iWgs 98 +W++ Migut.A01003.1.p 111 LWEQ 114 **85 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 7.5E-19 | 25 | 113 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence Send to blast |
MIKNNDTQTV SEEEEVHASP SHNKFAKVFR EEDEIGVLEG LYVYWKCNGV NHEWKKYHDF 60 IKDDLPHHFS STQLSEKIRR LRLKFQSNSR NNNIHFRNAH ESLVFDLSKK LWEQEFISTS 120 TNTTPPPPPP SDVGRKICDG DADCDADDGD GDGDGDGDGD GDGEDSMKIA SKKQEFDAAS 180 FPHISALFDR FGFSASKYLT GVNNKKLKKL EKQSRKLIMQ ENQLLLEEML LRKKQCALVV 240 SAFKKCNS* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.A01003.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841297.1 | 1e-119 | PREDICTED: uncharacterized protein LOC105961610 | ||||
TrEMBL | A0A022R3F5 | 0.0 | A0A022R3F5_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.A01003.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13664 | 4 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 6e-10 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.A01003.1.p |