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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr7g099540.1 |
Common Name | MTR_7g099540 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
bHLH |
Protein Properties |
Length: 468aa MW: 52121.5 Da PI: 6.0272 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr7g099540.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.5 | 7.8e-16 | 262 | 308 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L+el+P + K +Ka++L +A++Y+ksLq
Medtr7g099540.1 262 VHNLSERRRRDRINEKMKALQELIPRS-----NKSDKASMLDEAIDYLKSLQ 308
6*************************7.....5******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MNNYCVSYFQ SQMDQQRLPR PKKPIIADDE IMELLWQNGQ VVTQRPNHRH AKKPPSCQET 60 TRGGGASPVE NYNQYLFMQE NEMASWLHYD DSPFDRTFST DYLNTPPATA NNNSSIQTPT 120 SVVPSRPPIP PPRRMGHVQP ETPNFAKHGV MNTAVRESTV VDSCDTPAVM PAAFSETVKS 180 LADQTEGDTE VAVVSTTFDE PGGSSSSEEP EPVGKVAEQD RKRKGIEAEE WEYQSEDVDF 240 ESAEAKKNIS GSSTKRSRAA EVHNLSERRR RDRINEKMKA LQELIPRSNK SDKASMLDEA 300 IDYLKSLQLQ VQRVQLMQMM SMGCGMVPMM FPGIQQYMPT VGMGMGMGME MGINRPVMPF 360 PNMLSGSALP AAANLGPRFA MPPFHMPHVP TPGSSRMQAA NQVDNNVITS AGTHDSNQSR 420 TPNFSDSYQQ YLGPHQMQFQ LMQNQAMNQP NVSRPLEKPE TRQSGDK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC146681 | 0.0 | AC146681.23 Medicago truncatula clone mth2-77o10, complete sequence. |
GenBank | AC161749 | 0.0 | AC161749.3 Medicago truncatula chromosome 7 clone mth2-182g1, complete sequence. |